CAZyme Information

Basic Information
SpeciesMedicago truncatula
Cazyme IDMedtr5g026360.1
FamilyGT4
Protein PropertiesLength: 487 Molecular Weight: 54981.8 Isoelectric Point: 8.3597
ChromosomeChromosome/Scaffold: 5 Start: 10583568 End: 10585028
DescriptionUDP-Glycosyltransferase superfamily protein
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT43064474.4e-24
  VFGVAGRLVKDKGHPLLHEAFSRLITKYTNVYLIVAGSGPWENRYKDIGNQVLVLGSMNPSMLRAFYNAIDIFVNPTLRPQGLDLTLMEAMMIGKPLLAS
  RFPSIKGSILVDDEFGYMFSPNVDSLLEELEQVVKDGKERLE
Full Sequence
Protein Sequence     Length: 487     Download
MAFNNKSKKT NSPSHFNFCI TLFSISFFII PTFFLLNNST SNSKCTNLTK TFSGDLRSAE    60
FSWNSLSFSQ HGNPSPVILK IAVFSRKWPM GTVPGGMERH AHTLYTALAR RGHQVHVFTS    120
PSEDKTTTTT SISSKGSPSS PYIHFHEGEP GKWRYNKAFE LFLEENQRDQ PFDVVHSESV    180
ALPHWLAKDL PNLVVSWHGI ALESLQSSIF QDLARLPDEP RSQDFEKGLQ GVVPKVLNEI    240
RFFNKYSHHV AISDSCGEML RDVYQIPSRR VHVILNGVDE EDFREDAELG KEFRTKIGIP    300
SNASLVFGVA GRLVKDKGHP LLHEAFSRLI TKYTNVYLIV AGSGPWENRY KDIGNQVLVL    360
GSMNPSMLRA FYNAIDIFVN PTLRPQGLDL TLMEAMMIGK PLLASRFPSI KGSILVDDEF    420
GYMFSPNVDS LLEELEQVVK DGKERLERRG NACREYANSM FTAKKMALAY ERLFLCIKRD    480
TFCTYP* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd03807GT1_WbnK_like7.0e-3394474395+
TIGR00032argG5.0e-3495473394+
cd03811GT1_WabH_like3.0e-3795463380+
cd03798GT1_wlbH_like9.0e-4295473399+
cd03801GT1_YqgM_like7.0e-6180474406+
Gene Ontology
GO TermDescription
GO:0009058biosynthetic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
RefSeqXP_002271072.104248637493PREDICTED: hypothetical protein [Vitis vinifera]
RefSeqXP_002271108.1014861492PREDICTED: hypothetical protein [Vitis vinifera]
RefSeqXP_002303479.1014851488predicted protein [Populus trichocarpa]
RefSeqXP_002326600.1014851487predicted protein [Populus trichocarpa]
RefSeqXP_002519899.1014862486glycosyltransferase, putative [Ricinus communis]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB2gek_A0.0000000029346633377A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi
PDB2gej_A0.0000000029346633377A Chain A, Crystal Structure Of Phosphatidylinositol Mannosyltransferase (Pima) From Mycobacterium Smegmatis In Complex With Gdp-Man
PDB2jjm_L0.00000000310848040388A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558.
PDB2jjm_K0.00000000310848040388A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558.
PDB2jjm_J0.00000000310848040388A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558.
Transmembrane Domains
StartEnd
1335
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
AM7324152831704520
GR1862222611794390
CO9850292262624870
FG1633432582294850
GO0171281982894860
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_055_00071.1Aquca_004_00554.1
Arabidopsis lyrata316266919149492915
Arabidopsis thalianaAT1G73160.1AT5G59070.1AT4G19460.1
Brachypodium distachyonBradi2g45370.1
Brassica rapaBra012542Bra003857Bra013399Bra020331
Carica papayaevm.model.supercontig_305.3
Capsella rubellaCarubv10004612mCarubv10021524m
Citrus clementinaCiclev10008126mCiclev10003490m
Citrus sinensisorange1.1g039338morange1.1g044542m
Cucumis sativusCucsa.268510.1
Eucalyptus grandisEucgr.E01172.1Eucgr.F03250.1
Fragaria vescamrna27708.1-v1.0-hybridmrna27178.1-v1.0-hybrid
Glycine maxGlyma09g34990.1Glyma01g35440.1Glyma16g17250.1Glyma16g08210.1
Gossypium raimondiiGorai.009G372800.1Gorai.008G217900.1
Linum usitatissimumLus10032187Lus10014499Lus10033297Lus10034760
Malus domesticaMDP0000252217MDP0000510770MDP0000280727MDP0000690085
Manihot esculentacassava4.1_023608mcassava4.1_022788m
Medicago truncatulaMedtr8g071900.1
Mimulus guttatusmgv1a005617mmgv1a027119m
Oryza sativaLOC_Os01g46430.1
Panicum virgatumPavirv00039421mPavirv00050283m
Physcomitrella patensPp1s115_97V6.1Pp1s115_97V6.2Pp1s231_59V6.1
Phaseolus vulgarisPhvul.002G124600.1Phvul.003G277200.1
Picea abiesMA_159118g0690MA_58772g0010
Populus trichocarpaPotri.011G097000.1Potri.003G105500.1Potri.001G128300.1
Prunus persicappa004871mppa024212m
Ricinus communis30150.m00047029827.m002616
Setaria italicaSi001150m
Selaginella moellendorffii79637
Sorghum bicolorSb03g029770.1
Thellungiella halophilaThhalv10013459mThhalv10027268mThhalv10019571m
Vitis viniferaGSVIVT01036920001GSVIVT01036921001GSVIVT01036924001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny