| Basic Information | |
|---|---|
| Species | Medicago truncatula |
| Cazyme ID | Medtr5g030600.1 |
| Family | GT5 |
| Protein Properties | Length: 503 Molecular Weight: 56267.2 Isoelectric Point: 8.0399 |
| Chromosome | Chromosome/Scaffold: 5 Start: 12620557 End: 12624794 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT5 | 192 | 415 | 2.1e-40 |
| HIIHICTEMTPLVSRGSVASYVTGISRALQRKGHLAEVILPKYACLDLDEVQGLREVNVEVYSYFNGQLHGNRIWTGLVCVVYGVGVTLIEPLDHSSFFS REMIYGYPDDFERFSYFCRASLDYIVKCGKQPDILHLHNWETAIVAPLFWDVFVNKGLGGTRILLTIHNFNSQVSCTCFPIGYGTEQPDKLALCGLDPSS LHCHRLQDNTNTQLVNILKRIFTL | |||
| Full Sequence |
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| Protein Sequence Length: 503 Download |
| MVALLNSTMP ILGIPSSFLQ KPISLPALSC FRNNGDVSGL HEQRLEVNKN EDISKSLSDD 60 GQNVKHDNIW QLFREAQQNI LYLNNQRLGA IEELNKIKKE KQSILDKIKK LEAVKQESAD 120 KLSICSELLL RIDSMVLGNV ISPAEASDFR SLVLHHKVSV ADVFNVISHK RDSELVGELR 180 HFSDQSKKNG FHIIHICTEM TPLVSRGSVA SYVTGISRAL QRKGHLAEVI LPKYACLDLD 240 EVQGLREVNV EVYSYFNGQL HGNRIWTGLV CVVYGVGVTL IEPLDHSSFF SREMIYGYPD 300 DFERFSYFCR ASLDYIVKCG KQPDILHLHN WETAIVAPLF WDVFVNKGLG GTRILLTIHN 360 FNSQVSCTCF PIGYGTEQPD KLALCGLDPS SLHCHRLQDN TNTQLVNILK RIFTLASRSK 420 VYFVGNCNFS SISSVGSSTK IMSSDKNAYR GTISWIGSLS TSITSKDKDS KLTHGVYETV 480 TQTWTWTPNT ASTQNTSNNL RK* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02939 | PLN02939 | 9.0e-6 | 14 | 133 | 124 | + transferase, transferring glycosyl groups | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 1.0e-36 | 192 | 410 | 224 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| PLN02316 | PLN02316 | 9.0e-37 | 186 | 360 | 175 | + synthase/transferase | ||
| TIGR02095 | glgA | 7.0e-42 | 191 | 410 | 224 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| PLN02939 | PLN02939 | 7.0e-72 | 99 | 410 | 318 | + transferase, transferring glycosyl groups | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACD13787.1 | 0 | 28 | 410 | 39 | 409 | starch synthase V precursor [Lotus japonicus] |
| GenBank | ACD13788.1 | 0 | 21 | 410 | 27 | 402 | starch synthase V precursor [Solanum tuberosum] |
| GenBank | ACD13789.1 | 0 | 1 | 410 | 1 | 406 | starch synthase V precursor [Vitis vinifera] |
| RefSeq | XP_002265421.1 | 0 | 1 | 347 | 1 | 352 | PREDICTED: similar to starch synthase V [Vitis vinifera] |
| RefSeq | XP_002310316.1 | 0 | 66 | 410 | 64 | 395 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3guh_A | 0.0002 | 192 | 364 | 2 | 166 | A Chain A, Crystal Structure Of The Nasturtium Seedling Xyloglucanase Isoform Nxg1 |
| PDB | 2r4u_A | 0.0002 | 192 | 364 | 2 | 166 | A Chain A, Crystal Structure Of The Nasturtium Seedling Xyloglucanase Isoform Nxg1 |
| PDB | 2r4t_A | 0.0002 | 192 | 364 | 2 | 166 | A Chain A, Crystal Structure Of The Nasturtium Seedling Xyloglucanase Isoform Nxg1 |
| PDB | 2qzs_A | 0.0002 | 192 | 364 | 2 | 166 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
| PDB | 3cx4_A | 0.0002 | 192 | 364 | 2 | 166 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| BF004024 | 253 | 4 | 256 | 0 |
| EV255533 | 223 | 1 | 223 | 0 |
| HO805493 | 270 | 137 | 405 | 0 |
| AW693522 | 178 | 5 | 182 | 0 |
| AW693522 | 22 | 182 | 203 | 0.0001 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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