Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr5g030860.1 |
Family | GH3 |
Protein Properties | Length: 784 Molecular Weight: 85866.8 Isoelectric Point: 5.8347 |
Chromosome | Chromosome/Scaffold: 5 Start: 12766808 End: 12771719 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 75 | 332 | 0 |
SISHLGIPSYQWWSEALHGIATNGPGVNFNGSVKSATNFPQVIVSAAAFNRSLWFLIGYAVGVEGRAMFNVGQAGLSFWAPNVNVFRDPRWGRGQETPGE DPMVGSAYAVEFVRGIQGVDGIKKVLNDHDSDDDGLMVSACCKHFTAYDLEKWGEFSRYNFNAVVTQQDLEDTYQPPFRGCVQQGKASCLMCSYNEVNGV PACASKDLLGLVRNKWGFEGYIASDCDAVATVFEYQKYAKSAEDAVADVLKAGMDINC |
Full Sequence |
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Protein Sequence Length: 784 Download |
MMFLQQRSTI IIFLFSLLLI HLPKFFTTPD YPCKPPHSHY PFCNISLPIS TRTTSLISLL 60 TLSDKINQLS NTASSISHLG IPSYQWWSEA LHGIATNGPG VNFNGSVKSA TNFPQVIVSA 120 AAFNRSLWFL IGYAVGVEGR AMFNVGQAGL SFWAPNVNVF RDPRWGRGQE TPGEDPMVGS 180 AYAVEFVRGI QGVDGIKKVL NDHDSDDDGL MVSACCKHFT AYDLEKWGEF SRYNFNAVVT 240 QQDLEDTYQP PFRGCVQQGK ASCLMCSYNE VNGVPACASK DLLGLVRNKW GFEGYIASDC 300 DAVATVFEYQ KYAKSAEDAV ADVLKAGMDI NCGTFMLRHT ESAIEQGLVK EEDLDRALFN 360 LFSVQMRLGL FNGDPEKGKF GKLGPQDVCT PEHKKLALEA ARQGIVLLKN DNKFLPLDKK 420 DRVSLAIIGP MATTSELGGG YSGIPCSPRS LYDGLKEYVK TISYAFGCSD VKCDSDDGFA 480 VAIDIAKQAD FVVIVAGLDT TLETEDLDRV SLLLPGKQMD LVSRVAAASK RPVILVLTGG 540 GPLDVSFAES NQLITSILWI GYPGEAGGKA LAEIIFGEFN PAGRLPMTWY PESFTNVPMN 600 DMGMRADPSR GYPGRTYRFY TGSRIYGFGH GLSYSDFSYR VLSAPSKLSL SKTTNGGLRR 660 SLLNKVEKDV FEVDHVHVDE LQNCNSLSFS VHISVMNVGD MDGSHVVMLF SKWPKNIQGS 720 PESQLVGPSR LHTVSNKSIE TSILADPCEH FSFADEQGKR ILPLGNHILN VGDVEHIVSI 780 EIY* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1472 | BglX | 2.0e-53 | 73 | 469 | 404 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam01915 | Glyco_hydro_3_C | 7.0e-58 | 405 | 635 | 237 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
pfam00933 | Glyco_hydro_3 | 1.0e-59 | 65 | 357 | 298 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 4.0e-71 | 111 | 710 | 648 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 27 | 782 | 761 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABY48135.1 | 0 | 2 | 783 | 1 | 776 | beta-D-xylosidase [Medicago truncatula] |
EMBL | CBI25718.1 | 0 | 8 | 782 | 2 | 768 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_196618.1 | 0 | 2 | 781 | 1 | 791 | glycosyl hydrolase family 3 protein [Arabidopsis thaliana] |
RefSeq | XP_002264031.1 | 0 | 8 | 782 | 2 | 789 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002299457.1 | 0 | 24 | 783 | 23 | 780 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 153 | 753 | 128 | 706 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
PDB | 3u48_A | 0 | 153 | 753 | 128 | 706 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
PDB | 3u4a_B | 0 | 153 | 753 | 128 | 706 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
PDB | 3u4a_A | 0 | 153 | 753 | 128 | 706 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
PDB | 2x41_A | 4e-37 | 52 | 643 | 3 | 609 | A Chain A, Raphanus Sativus Anionic Peroxidase. |