Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr5g044530.1 |
Family | CBM43 |
Protein Properties | Length: 257 Molecular Weight: 25077.6 Isoelectric Point: 5.7068 |
Chromosome | Chromosome/Scaffold: 5 Start: 19136133 End: 19138630 |
Description | plasmodesmata callose-binding protein 3 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 23 | 105 | 1.1e-30 |
CVCKDGVGDQNLQKAIDYACGAGADCTQIQQNGPCFQPNTIKDHCNYAVNSYFQKKGQAQGACDFAGMATPSQTPPTSSTSSC |
Full Sequence |
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Protein Sequence Length: 257 Download |
MALLAYFVLF LSLTGYSSGA LYCVCKDGVG DQNLQKAIDY ACGAGADCTQ IQQNGPCFQP 60 NTIKDHCNYA VNSYFQKKGQ AQGACDFAGM ATPSQTPPTS STSSCAYPSS GNTGGGTTTT 120 PATNTPVGIS PPSTVTPTTP TGTTPSTGTG TPTGTGTGTG TGTGTGTPTG TGTGTGMGTP 180 TGTGTGTGIG TGTGTGTGTG TTTGGPNVFG ISPTTSSSGN SGFSDPNGEG VQLKKCTYVL 240 LTSLVFTIWL AAAIRD* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 1.0e-21 | 21 | 91 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 4.0e-30 | 21 | 91 | 71 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU14053.1 | 0 | 1 | 115 | 1 | 113 | unknown [Glycine max] |
GenBank | ACU20773.1 | 0 | 1 | 115 | 1 | 113 | unknown [Glycine max] |
GenBank | ACU20773.1 | 0.007 | 203 | 251 | 166 | 213 | unknown [Glycine max] |
EMBL | CAN73948.1 | 0 | 1 | 115 | 1 | 114 | hypothetical protein [Vitis vinifera] |
EMBL | CBI27282.1 | 0 | 1 | 113 | 1 | 112 | unnamed protein product [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 3e-17 | 22 | 112 | 13 | 101 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |