| Basic Information | |
|---|---|
| Species | Medicago truncatula |
| Cazyme ID | Medtr5g053610.1 |
| Family | CBM57 |
| Protein Properties | Length: 633 Molecular Weight: 69298.4 Isoelectric Point: 6.1978 |
| Chromosome | Chromosome/Scaffold: 5 Start: 21537696 End: 21546746 |
| Description | Di-glucose binding protein with Leucine-rich repeat domain |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM57 | 214 | 366 | 7.3e-21 |
| DRFGRSWQSDSDYRISGSGSRRNKVVAVSTRRNIAGTNQKPNYFPAKLYETAATTAETAEEGGGVLEFELNVDAKLDYLVWLHFAEIEDRVRKAGERVFD VFINGDNLTRVDIYKQVGGLAAFTWHHTVKNLSSSSLIVKLVGVVGAPIICGI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 633 Download |
| MPLPLILFFS ILTTVSTALP YGISYHIDCG TPTNTTDSFN TTWLSDRFFT GGTTGFVSEP 60 LQFHHHHEKT LRFFPISSGK KNCYSIPSST TSRYLIRTFV VYDNYDGKSH PPSFDVSVSG 120 TVVFSWRSPW PQNLARDGAY SDLFASFKEQ EDVLICFYSF ATDPPVVSSI ELFGVDPASY 180 DSASIGNNDT ILVNYGRVSC GSNQWGPGFT NDDDRFGRSW QSDSDYRISG SGSRRNKVVA 240 VSTRRNIAGT NQKPNYFPAK LYETAATTAE TAEEGGGVLE FELNVDAKLD YLVWLHFAEI 300 EDRVRKAGER VFDVFINGDN LTRVDIYKQV GGLAAFTWHH TVKNLSSSSL IVKLVGVVGA 360 PIICGIENYA LVPGDPSTVP QQVIAMKALK DSLRVPERMG WNGDPCAPTN WDAWEGVTCR 420 MSKDNTALVI SQIDLGSQGL KGFISDQISL LSDLVSLNLS SNLLVGEVPP GLGQKSLIHL 480 DLSNNQLTGS IPDSITSSSL QLVLLNGNLL EGQVPDELYS IGVHGGAIDL SGNKGLCGVP 540 SLPACPMFWK NGKLSTEGKI AIGVSSLFVF CLIVLLVYIY IRRRRNDYDF ALPHELTALA 600 AKRNRYQRQK SLMVLEMESQ HAKGLPSPSA TQ* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN00113 | PLN00113 | 0.0008 | 409 | 492 | 92 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| pfam11721 | Malectin | 3.0e-10 | 197 | 366 | 188 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
| pfam12819 | Malectin_like | 8.0e-46 | 27 | 369 | 358 | + Carbohydrate-binding protein of the ER. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. The domain is found on a number of plant receptor kinases. | ||
| PLN03150 | PLN03150 | 2.0e-89 | 6 | 574 | 587 | + hypothetical protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005515 | protein binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAG50525.1 | 0 | 15 | 605 | 20 | 550 | AC084221_7 hypothetical protein [Arabidopsis thaliana] |
| RefSeq | NP_564237.2 | 0 | 15 | 627 | 20 | 622 | leucine-rich repeat protein-related [Arabidopsis thaliana] |
| RefSeq | XP_002281668.1 | 0 | 20 | 627 | 26 | 621 | PREDICTED: similar to leucine-rich repeat protein-related [Vitis vinifera] |
| RefSeq | XP_002457393.1 | 0 | 24 | 625 | 29 | 625 | hypothetical protein SORBIDRAFT_03g006620 [Sorghum bicolor] |
| RefSeq | XP_002524408.1 | 0 | 20 | 603 | 19 | 591 | serine-threonine protein kinase, plant-type, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3rj0_A | 0.000006 | 429 | 515 | 221 | 308 | A Chain A, The Crystal Structure Of A Hyperthermoactive Exopolygalacturonase From Thermotoga Maritima |
| PDB | 3rj0_A | 0.00006 | 404 | 545 | 608 | 745 | A Chain A, The Crystal Structure Of A Hyperthermoactive Exopolygalacturonase From Thermotoga Maritima |
| PDB | 3rj0_A | 0.004 | 454 | 521 | 393 | 462 | A Chain A, The Crystal Structure Of A Hyperthermoactive Exopolygalacturonase From Thermotoga Maritima |
| PDB | 3rj0_A | 0.006 | 440 | 518 | 451 | 531 | A Chain A, The Crystal Structure Of A Hyperthermoactive Exopolygalacturonase From Thermotoga Maritima |
| PDB | 3rj0_A | 0.008 | 440 | 519 | 475 | 556 | A Chain A, The Crystal Structure Of A Hyperthermoactive Exopolygalacturonase From Thermotoga Maritima |
