| Basic Information | |
|---|---|
| Species | Medicago truncatula |
| Cazyme ID | Medtr5g062190.1 |
| Family | GH5 |
| Protein Properties | Length: 484 Molecular Weight: 54618.5 Isoelectric Point: 6.4374 |
| Chromosome | Chromosome/Scaffold: 5 Start: 25017212 End: 25022451 |
| Description | |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH5 | 197 | 471 | 2.70451e-43 |
| KDHWSSFIVEDDFKFIARNGLNAVRIPVGWWIASDPTPPWPYVGGSLHALDNAFSWAKKYGLKIIIDLHAAPGSQNGFQHSSTRDGSQEWGQSDENIQQT VDVISFLTARYTKNPSLYAVELLNEPLSPGVTLETINKYYKAGYDAVRKHSTTTYVVMSNRLGPSEPKELFPLANGLMRSVIDVHYYNIFDDSFENMSAQ QNIDFIYNNRSSELNFITTSNGPLTFVGEWVSDWRVKDATKEDFQRFGKAQIEVFGEATFGWSYWAFKNANLHWS | |||
| Full Sequence |
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| Protein Sequence Length: 484 Download |
| MTHGRPINPE FRVKAVNLGG WLVTEGWMKP SLFDAIPNKD FLDGAGLQFK SVTTKKYLCA 60 ESGGGTILVA NRSSASGWET FRLWRINKET FRFKVFNKQF VGLDGYNVVA VSNSSIDSET 120 FHIVKENDNS TFVRIKASNG YFLQAKTETL VTADISEVRG WKDDDPTVFE MTIAARLQGD 180 FQITNGYGPI KAAQVMKDHW SSFIVEDDFK FIARNGLNAV RIPVGWWIAS DPTPPWPYVG 240 GSLHALDNAF SWAKKYGLKI IIDLHAAPGS QNGFQHSSTR DGSQEWGQSD ENIQQTVDVI 300 SFLTARYTKN PSLYAVELLN EPLSPGVTLE TINKYYKAGY DAVRKHSTTT YVVMSNRLGP 360 SEPKELFPLA NGLMRSVIDV HYYNIFDDSF ENMSAQQNID FIYNNRSSEL NFITTSNGPL 420 TFVGEWVSDW RVKDATKEDF QRFGKAQIEV FGEATFGWSY WAFKNANLHW SLEWMINNGY 480 IKL* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd00257 | Fascin | 6.0e-6 | 49 | 158 | 110 | + Fascin-like domain; members include actin-bundling/crosslinking proteins facsin, histoactophilin and singed; identified in sea urchin, Drosophila, Xenopus, rodents, and humans; The fascin-like domain adopts a beta-trefoil topology and contains an internal threefold repeat; the fascin subgroup contains four copies of the domain; Structurally similar to fibroblast growth factor (FGF) | ||
| pfam00150 | Cellulase | 9.0e-13 | 199 | 467 | 283 | + Cellulase (glycosyl hydrolase family 5). | ||
| COG2730 | BglC | 1.0e-32 | 197 | 480 | 322 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI18831.1 | 0 | 8 | 483 | 30 | 505 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI33033.1 | 0 | 8 | 483 | 30 | 505 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI33035.1 | 0 | 8 | 464 | 30 | 486 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002285806.1 | 0 | 1 | 483 | 23 | 508 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002513884.1 | 0 | 1 | 483 | 21 | 506 | conserved hypothetical protein [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1eqp_A | 1e-37 | 180 | 479 | 45 | 376 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans |
| PDB | 2pc8_A | 2e-37 | 180 | 479 | 51 | 382 | A Chain A, E292q Mutant Of Exo-B-(1,3)-Glucanase From Candida Albicans In Complex With Two Separately Bound Glucopyranoside Units At 1.8 A |
| PDB | 1eqc_A | 2e-37 | 180 | 479 | 45 | 376 | A Chain A, E292q Mutant Of Exo-B-(1,3)-Glucanase From Candida Albicans In Complex With Two Separately Bound Glucopyranoside Units At 1.8 A |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DC898905 | 379 | 105 | 483 | 0 |
| FS330569 | 262 | 8 | 269 | 0 |
| DY617298 | 226 | 245 | 470 | 0 |
| GO266806 | 281 | 65 | 345 | 0 |
| DC899299 | 319 | 165 | 483 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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