CAZyme Information

Basic Information
SpeciesMedicago truncatula
Cazyme IDMedtr5g062290.1
FamilyGH5
Protein PropertiesLength: 506 Molecular Weight: 57622.5 Isoelectric Point: 8.9469
ChromosomeChromosome/Scaffold: 5 Start: 25066375 End: 25070911
Description
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH52094941.30321e-43
  YGLKKAPQIMKEHWSTFIVEDDFKFIARNGLNAVRIPVGWWIASDPTPPWPYVGGSLHALDNAFLWAEKYGLKVMIDLHAAPDSQNGYEHSSSRDGAQEW
  GKTDESIKQTVQVIDFLTARYAKSPSLYAVELLNEPRSPDATLESLNKYYKDGYEAVRKHSSTVFVVFSNRLGSSMPREFFPLANGLMGSVIDVHYYSIF
  GDEFTNMSVQQNIDYIYNNRSSDLNFVTTSNGPLIFVGEWVAEWQVKGAIKNDYKRFGKAQLDVYGRATFGYAYWAFKNVNKHWSL
Full Sequence
Protein Sequence     Length: 506     Download
MKNCINLKIW FLNLIIMLFV MLSTTHGRPN QKFRLKAVNL GGWLVTEGWI KPSLFDAIPS    60
KDFLDGTGLQ FKSVTTKKYL CAESGGGTIL VANRSSASGW ETFKLWRINK ETFRFRVFNK    120
QFVGLDGYNV VAVSNSSIDS ETFHIVKEND NSTRVRIKAS NGYFLQVKTE EVVTADVSLV    180
NEWRNDDPTI FVMTISDRMQ GEFQITNGYG LKKAPQIMKE HWSTFIVEDD FKFIARNGLN    240
AVRIPVGWWI ASDPTPPWPY VGGSLHALDN AFLWAEKYGL KVMIDLHAAP DSQNGYEHSS    300
SRDGAQEWGK TDESIKQTVQ VIDFLTARYA KSPSLYAVEL LNEPRSPDAT LESLNKYYKD    360
GYEAVRKHSS TVFVVFSNRL GSSMPREFFP LANGLMGSVI DVHYYSIFGD EFTNMSVQQN    420
IDYIYNNRSS DLNFVTTSNG PLIFVGEWVA EWQVKGAIKN DYKRFGKAQL DVYGRATFGY    480
AYWAFKNVNK HWSLEWMMKN GYIKF* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
pfam06268Fascin0.00478182108+
cd00257Fascin4.0e-871183113+
pfam00150Cellulase4.0e-11221487283+
COG2730BglC1.0e-24221502320+
Gene Ontology
GO TermDescription
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005975carbohydrate metabolic process
GO:0030674protein binding, bridging
GO:0051015actin filament binding
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
EMBLCBI18831.103550535505unnamed protein product [Vitis vinifera]
RefSeqNP_001064458.102650531508Os10g0370500 [Oryza sativa (japonica cultivar-group)]
RefSeqXP_002285806.10115059508PREDICTED: hypothetical protein [Vitis vinifera]
RefSeqXP_002464704.103550543514hypothetical protein SORBIDRAFT_01g024390 [Sorghum bicolor]
RefSeqXP_002513884.1015051506conserved hypothetical protein [Ricinus communis]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB1eqp_A6e-3420250145376A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans
PDB1eqc_A1e-3320250145376A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans
PDB1cz1_A1e-3320250145376A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans At 1.85 A Resolution
Transmembrane Domains
StartEnd
726
Signal Peptide
Cleavage Site
27
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
EY47809225312530
DC8989053791275050
FS330569261302900
GO266806281873670
JG5647013001894880
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_010_00111.1Aquca_010_00110.1
Brachypodium distachyonBradi2g31690.1Bradi3g38500.1
Carica papayaevm.model.supercontig_55.63evm.model.supercontig_66.87evm.model.supercontig_20.222
Citrus clementinaCiclev10025463mCiclev10026955mCiclev10025415mCiclev10000913m
Citrus sinensisorange1.1g009560morange1.1g046395morange1.1g019395morange1.1g013777morange1.1g010600m
orange1.1g009475m
Cucumis sativusCucsa.104180.2Cucsa.104180.1
Eucalyptus grandisEucgr.I00417.1Eucgr.L01170.1Eucgr.L02139.1Eucgr.I00543.1Eucgr.I00415.1
Eucgr.F00486.1Eucgr.F00489.1Eucgr.F00489.3Eucgr.F00489.2Eucgr.F00487.1
Eucgr.L01169.1Eucgr.F00488.1Eucgr.I00415.2
Fragaria vescamrna16220.1-v1.0-hybridmrna16368.1-v1.0-hybridmrna22085.1-v1.0-hybridmrna16374.1-v1.0-hybrid
Glycine maxGlyma11g37881.1Glyma18g01781.2Glyma18g01781.3Glyma18g01781.1Glyma06g47761.6
Glyma06g47761.1Glyma06g47761.5Glyma06g47761.2Glyma06g47761.8Glyma06g47761.4
Glyma06g47761.7Glyma06g47761.3Glyma13g02030.2Glyma06g47750.1Glyma13g02000.1
Glyma08g14676.1Glyma05g31460.1Glyma14g34450.1
Gossypium raimondiiGorai.009G239600.6Gorai.009G239600.5Gorai.009G239600.4Gorai.009G239600.1Gorai.009G239600.3
Gorai.009G239600.2Gorai.009G239600.7Gorai.011G110800.2Gorai.011G110800.1Gorai.003G041900.1
Gorai.003G044300.1Gorai.003G044000.4Gorai.003G044000.5Gorai.003G044200.1Gorai.003G044000.3
Gorai.003G044000.2Gorai.003G044000.1
Linum usitatissimumLus10041110Lus10036436
Malus domesticaMDP0000319015MDP0000123200MDP0000133367
Manihot esculentacassava4.1_007845mcassava4.1_026104mcassava4.1_006238m
Medicago truncatulaMedtr3g009020.1Medtr3g086750.1Medtr3g009030.1Medtr3g008960.1Medtr5g062190.1
Medtr3g009010.1Medtr8g091310.1
Mimulus guttatusmgv1a004896mmgv1a019918m
Oryza sativaLOC_Os10g22570.1.193.483LOC_Os10g22570.1.193.483LOC_Os10g22570.1.193.483LOC_Os10g22520.1LOC_Os10g22570.1.671.954
LOC_Os10g22570.1.671.954LOC_Os10g22570.1.671.954LOC_Os05g15510.2LOC_Os05g15510.1LOC_Os08g37750.1
Panicum virgatumPavirv00046245mPavirv00011301mPavirv00018291mPavirv00046244mPavirv00011300m
Pavirv00028658mPavirv00000970mPavirv00042459mPavirv00046564m
Physcomitrella patensPp1s304_43V6.1
Phaseolus vulgarisPhvul.001G254400.1Phvul.008G171300.1Phvul.002G261800.1Phvul.008G171400.1
Picea abiesMA_10427061g0010MA_479818g0010MA_4911g0010MA_14445g0010MA_23595g0010
Populus trichocarpaPotri.007G010000.1Potri.005G167800.1Potri.007G089400.1Potri.007G089400.2Potri.005G078500.1
Potri.002G093000.1
Prunus persicappa023601mppa005425mppa019648m
Ricinus communis29810.m00014529908.m00599427889.m00017327905.m00007336339.m000016
Setaria italicaSi035257mSi006205mSi021695mSi021671mSi039329m
Si013558mSi035337m
Selaginella moellendorffii12682742658240418324801
Sorghum bicolorSb10g007500.1Sb09g008170.1Sb01g024390.1Sb10g008480.1
Vitis viniferaGSVIVT01003438001GSVIVT01006372001GSVIVT01006369001GSVIVT01002801001GSVIVT01008995001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny  (This image is cropped. Click for full image.)