| Basic Information | |
|---|---|
| Species | Medicago truncatula |
| Cazyme ID | Medtr5g062320.1 |
| Family | GH3 |
| Protein Properties | Length: 781 Molecular Weight: 85900.5 Isoelectric Point: 9.3408 |
| Chromosome | Chromosome/Scaffold: 5 Start: 25087763 End: 25093260 |
| Description | Glycosyl hydrolase family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH3 | 81 | 335 | 0 |
| AIPRLGIPSYQWWNEALHGVSYVGKGIRLNGSITAATSFPQIILIAASFDPKLWYRISKVIGTEARGVYNAGQAQGMTFWAPNINIFRDPRWGRGQETAG EDPLVNSKYGVSYVRGLQGDSFEGGKLIGGRLKASACCKHFTAYDLENWKGVNRYVFDAKVTLQDLADTYQPSFHSCVVQGRSSGIMCAYNRVNGVPNCA DYNLLTNTARKKWNFNGYIASDCDAVRFIYEKQGYAKTPEDVVADVLRAGMDVEC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 781 Download |
| MGHFSITITF IFLFLTRYHR LVHADSLATN VPPYSCDTSN PLTKSFPFCN LNLTITQRAK 60 DIVSRLTLDE KISQLVNTAP AIPRLGIPSY QWWNEALHGV SYVGKGIRLN GSITAATSFP 120 QIILIAASFD PKLWYRISKV IGTEARGVYN AGQAQGMTFW APNINIFRDP RWGRGQETAG 180 EDPLVNSKYG VSYVRGLQGD SFEGGKLIGG RLKASACCKH FTAYDLENWK GVNRYVFDAK 240 VTLQDLADTY QPSFHSCVVQ GRSSGIMCAY NRVNGVPNCA DYNLLTNTAR KKWNFNGYIA 300 SDCDAVRFIY EKQGYAKTPE DVVADVLRAG MDVECGNYMT KHAKSAVLQK KIPISQIDRA 360 LHNLFTIRIR LGLFDGNPTK LQYGRIGPNQ VCSKENLDLA LEAARSGIVL LKNTASILPL 420 PRVNTLGVIG PNANKSSIVL LGNYFGQPCK QVSILKGFYT YASQTHYRSG CTDGVKCASA 480 EIDRAVEVAK ISDYVILVMG LDQSQETETL DRDHLELPGK QQKLINSVAK ASKKPVILVI 540 LCGGPVDITF AKNNDKIGGI IWAGYPGELG GRALAQVVFG DYNPGGRLPM TWYPKDFIKI 600 PMTDMRMRAD PSSGYPGRTY RFYTGPKVYE FGYGLSYSNY SYNFISVKNN NIHINQSTTH 660 SILENSETIR YKLVSELGKK ACKTMSISVT LGITNTGSMA GKHPVLLFVK PKKGRNGNPV 720 KQLVGFESVT VEGGGKGEVG FEVSVCEHLS RANESGVKVI EEGGYLFLVG ELEYSINITL 780 * |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| COG1472 | BglX | 2.0e-55 | 70 | 434 | 375 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] |
| pfam01915 | Glyco_hydro_3_C | 9.0e-57 | 408 | 635 | 233 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. |
| pfam00933 | Glyco_hydro_3 | 3.0e-61 | 67 | 360 | 323 | + Glycosyl hydrolase family 3 N terminal domain. |
| PRK15098 | PRK15098 | 3.0e-73 | 39 | 726 | 775 | + beta-D-glucoside glucohydrolase; Provisional |
| PLN03080 | PLN03080 | 0 | 24 | 780 | 769 | + Probable beta-xylosidase; Provisional |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI19138.1 | 0 | 29 | 778 | 693 | 1409 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002285805.1 | 0 | 28 | 780 | 23 | 774 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002302285.1 | 0 | 32 | 780 | 26 | 773 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002306583.1 | 0 | 32 | 780 | 26 | 745 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002513892.1 | 0 | 11 | 780 | 8 | 774 | Periplasmic beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3u48_B | 0 | 117 | 770 | 91 | 722 | A Chain A, Crystal Structure Of Pyridoxine 4-Oxidase From Mesorbium Loti |
| PDB | 3u48_A | 0 | 117 | 770 | 91 | 722 | A Chain A, Crystal Structure Of Pyridoxine 4-Oxidase From Mesorbium Loti |
| PDB | 3u4a_B | 0 | 117 | 770 | 91 | 722 | A Chain A, Crystal Structure Of Pyridoxine 4-Oxidase From Mesorbium Loti |
| PDB | 3u4a_A | 0 | 117 | 770 | 91 | 722 | A Chain A, Crystal Structure Of Pyridoxine 4-Oxidase From Mesorbium Loti |
| PDB | 4i3g_B | 4e-39 | 52 | 443 | 47 | 411 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
