Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr5g062370.1 |
Family | GH3 |
Protein Properties | Length: 686 Molecular Weight: 75104.8 Isoelectric Point: 8.4227 |
Chromosome | Chromosome/Scaffold: 5 Start: 25109140 End: 25116972 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 10 | 231 | 0 |
PAATSFPQVILTAASFDPKLWYQISKVIGTEARGVYNAGQAQGMNFWAPNINIFRDPRWGRGQETAGEDPLVNSKYGVSYVRGLQGDSFEGGKLIGGRLK ASACCKHFTAYDLENWKGVNRYVFDAKVTLQDLADTYQPSFHSCVVQGRSSGIMCAYNRVNGVPNCADYNLLTNTARKKWNFNGYIASDCDAVRFIYEKQ GYAKTPEDVVADVLRAGMDLEC |
Full Sequence |
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Protein Sequence Length: 686 Download |
MGIILNGSIP AATSFPQVIL TAASFDPKLW YQISKVIGTE ARGVYNAGQA QGMNFWAPNI 60 NIFRDPRWGR GQETAGEDPL VNSKYGVSYV RGLQGDSFEG GKLIGGRLKA SACCKHFTAY 120 DLENWKGVNR YVFDAKVTLQ DLADTYQPSF HSCVVQGRSS GIMCAYNRVN GVPNCADYNL 180 LTNTARKKWN FNGYIASDCD AVRFIYEKQG YAKTPEDVVA DVLRAGMDLE CGNYMTKHAK 240 SAVLQKKIPI SQIDRALHNL FTIRIRLGLF DGNPTKLQYG RIGPNQVCSK ENLDLALEAA 300 RSGIVLLKNT ASILPLPRVN TLGVIGPNAN KSSIVLLGNY IGPPCKNVSI LKGFYTYASQ 360 THYHSGCTDG TKCASAEIDR AVEVAKISDY VILVMGLDQS QETETLDRDH LELPGKQQKL 420 INSVAKASKK PVILVLLCGG PVDITFAKNN DKIGGIIWAG YPGELGGRAL AQVVFGDYNP 480 GGRLPMTWYP KDFIKIPMTD MRMRADPSSG YPGRTYRFYT GPKVYEFGYG LSYSNYSYNF 540 ISVKNNNLHI NQSTTYSILE NSETINYKLV SELGEETCKT MSISVTLGIT NTGSMAGKHP 600 VLLFVKPKKG RNGNPVKQLV GFESVTVEGG GKGEVGFEVS VCEHLSRANE SGVKVIEEGG 660 YLFLVGQEEY SINIMLDELM PCNIE* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1472 | BglX | 2.0e-52 | 10 | 330 | 332 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 3.0e-55 | 11 | 256 | 250 | + Glycosyl hydrolase family 3 N terminal domain. | ||
pfam01915 | Glyco_hydro_3_C | 3.0e-57 | 304 | 531 | 233 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 8.0e-74 | 13 | 622 | 659 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 7 | 674 | 678 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI19138.1 | 0 | 2 | 619 | 101 | 692 | unnamed protein product [Vitis vinifera] |
EMBL | CBI19138.1 | 0 | 2 | 675 | 769 | 1410 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002285805.1 | 0 | 2 | 676 | 101 | 774 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002302285.1 | 0 | 2 | 676 | 100 | 773 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002513892.1 | 0 | 2 | 676 | 101 | 774 | Periplasmic beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 13 | 666 | 91 | 722 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
PDB | 3u48_A | 0 | 13 | 666 | 91 | 722 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
PDB | 3u4a_B | 0 | 13 | 666 | 91 | 722 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
PDB | 3u4a_A | 0 | 13 | 666 | 91 | 722 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
PDB | 2x41_A | 1e-36 | 12 | 674 | 78 | 707 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
AW775281 | 227 | 396 | 622 | 0 |
DY935537 | 298 | 47 | 343 | 0 |
BI311904 | 239 | 384 | 622 | 0 |
DY935482 | 301 | 48 | 347 | 0 |
DW017444 | 267 | 205 | 470 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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