Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr5g062650.1 |
Family | GH3 |
Protein Properties | Length: 786 Molecular Weight: 86318.5 Isoelectric Point: 8.1127 |
Chromosome | Chromosome/Scaffold: 5 Start: 25245536 End: 25250954 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 83 | 339 | 0 |
AIPRLGIHSYQWWSEALHGVADYGKGIRLNGNVTIKAATIFPQVILTAASFDSKLWYRISKVIGTEARAVYNAGQAEGMTFWAPNINIFRDPRWGRGQET AGEDPLVSAKYAVSFVRGLQGDSFEGGKLNEDRLKASACCKHFTAYDLDNWKGVDRFDFDANVTLQDLADTYQPPFHSCIVQGRSSGIMCAYNRVNGIPN CADYNLLTNTARKKWNFNGYITSDCSAVDIIHDRQGYAKAPEDAVADVLQAGMDVEC |
Full Sequence |
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Protein Sequence Length: 786 Download |
MGYLPITITF ISFIFLFLTR YNQLVHADSP TLVPPYSCDI TNPLTKSYTF CNLNLTTIQR 60 AKDIVSRLTL DEKLAQLVNT APAIPRLGIH SYQWWSEALH GVADYGKGIR LNGNVTIKAA 120 TIFPQVILTA ASFDSKLWYR ISKVIGTEAR AVYNAGQAEG MTFWAPNINI FRDPRWGRGQ 180 ETAGEDPLVS AKYAVSFVRG LQGDSFEGGK LNEDRLKASA CCKHFTAYDL DNWKGVDRFD 240 FDANVTLQDL ADTYQPPFHS CIVQGRSSGI MCAYNRVNGI PNCADYNLLT NTARKKWNFN 300 GYITSDCSAV DIIHDRQGYA KAPEDAVADV LQAGMDVECG DYFTSHSKSA VLQKKVPISQ 360 IDRALHNLFS IRIRLGLFDG HPTKLKYGKI GPNRVCSKQN LNIALEAARS GIVLLKNAAS 420 ILPLPKSTDS IVVIGPNANS SSQVVLGNYF GRPCNLVTIL QGFENYSDNL LYHPGCSDGT 480 KCVSAEIDRA VEVAKVVDYV VLVMGLDQSQ ESEGHDRDDL ELPGKQQELI NSVAKASKRP 540 VILVLFCGGP VDISFAKVDD KIGGILWAGY PGELGGMALA QVVFGDYNPG GRLPMTWYPK 600 DFIKIPMTDM RMRADPSSGY PGRTYRFYTG PKVYEFGYGL SYSNYSYNFI SVKNNNLHIN 660 QSTTYSILEK SQTIHYKLVS ELGKKACKTM SISVTLGITN TGSMAGKHPV LLFVKPKKGR 720 NGNPVKQLVG FESVTVEGGG KGEVGFEVSV CEHLSRANES GVKVIEEGGY LFLVGELEYS 780 INITL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01915 | Glyco_hydro_3_C | 4.0e-52 | 412 | 640 | 233 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
COG1472 | BglX | 2.0e-54 | 81 | 440 | 370 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 2.0e-61 | 69 | 364 | 325 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 2.0e-72 | 121 | 731 | 653 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 34 | 785 | 762 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI19138.1 | 0 | 14 | 783 | 674 | 1409 | unnamed protein product [Vitis vinifera] |
EMBL | CBI19138.1 | 0 | 31 | 728 | 24 | 692 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002285805.1 | 0 | 31 | 785 | 24 | 774 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002302285.1 | 0 | 34 | 785 | 26 | 773 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002513892.1 | 0 | 5 | 785 | 3 | 774 | Periplasmic beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 121 | 775 | 91 | 722 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 3u48_A | 0 | 121 | 775 | 91 | 722 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 3u4a_B | 0 | 121 | 775 | 91 | 722 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 3u4a_A | 0 | 121 | 775 | 91 | 722 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 2x41_A | 3.00018e-42 | 58 | 775 | 1 | 699 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |