Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr5g069740.1 |
Family | GH3 |
Protein Properties | Length: 618 Molecular Weight: 68270.9 Isoelectric Point: 5.4188 |
Chromosome | Chromosome/Scaffold: 5 Start: 28592577 End: 28597115 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 83 | 345 | 0 |
LESRLGIPIIYGTDAVHGNNNVYGTTIFPHNVALGATRDADLVQRIGAAISLELRASRTHYTCAPCVADSLRQQEKKGNYSSLEFVHKRDYSFHVVCKDP RWGRCYESYSEDTEIVRNMTSYVSGLQGQPPERHPRGYPFVAGRNKVIACAKHFVGDGGTEKGVNEGNTILSYEDLEKIHMASYVDCIAQGVSTIMVSYS SWNGVKLHGHHFLINDILKEKLGFKGFVISDWEGIDELCQPYGSDYRYCISTSINAGIDMVMV |
Full Sequence |
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Protein Sequence Length: 618 Download |
MDSVYMNPAE PVEARIKNLL SLMTLKEKIG QMTQIERSVT TPSAIKDFAI GSVYCAPPKN 60 ATSEKEVSSD WADLVDGFQK LALESRLGIP IIYGTDAVHG NNNVYGTTIF PHNVALGATR 120 DADLVQRIGA AISLELRASR THYTCAPCVA DSLRQQEKKG NYSSLEFVHK RDYSFHVVCK 180 DPRWGRCYES YSEDTEIVRN MTSYVSGLQG QPPERHPRGY PFVAGRNKVI ACAKHFVGDG 240 GTEKGVNEGN TILSYEDLEK IHMASYVDCI AQGVSTIMVS YSSWNGVKLH GHHFLINDIL 300 KEKLGFKGFV ISDWEGIDEL CQPYGSDYRY CISTSINAGI DMVMVPIRYE KFMEEIDDAV 360 ERILRVKFIA ELFEFPLTDR SLLDIVGCKI HRDLAREAVR KSLVLLKNGK EPSKPFIPLN 420 KNAKRILVAG THANDIGYQC GGWTFTKYGS SGQITIGTTI LDAVKEAVGH DTEVIYEKCP 480 STEFIECNEF SFAIVAIGEA PYAECGGDNK ELVIPFNGAG IVDIVSDKIP TLVILISGRP 540 LVLEQSLLEK TEALVAAWLP GSEGKGITDV IFGDHDFKGK LPMTWFRRIE QLDEPSEGVN 600 SCDDPLFPLG YGLACNK* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 4.0e-29 | 5 | 586 | 624 | + Probable beta-xylosidase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 6.0e-44 | 403 | 613 | 227 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 9.0e-63 | 8 | 614 | 691 | + beta-D-glucoside glucohydrolase; Provisional | ||
pfam00933 | Glyco_hydro_3 | 5.0e-73 | 24 | 366 | 360 | + Glycosyl hydrolase family 3 N terminal domain. | ||
COG1472 | BglX | 2.0e-81 | 23 | 468 | 466 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN81230.1 | 0 | 1 | 617 | 1 | 634 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_190284.1 | 0 | 4 | 613 | 9 | 603 | glycosyl hydrolase family 3 protein [Arabidopsis thaliana] |
RefSeq | XP_002279757.1 | 0 | 1 | 617 | 113 | 715 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002313393.1 | 0 | 4 | 615 | 7 | 596 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002525596.1 | 0 | 4 | 617 | 5 | 602 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1j8v_A | 0 | 4 | 616 | 4 | 600 | C Chain C, Crystal Structure Of Galectin 8 With Ndp52 Peptide |
PDB | 1iex_A | 0 | 4 | 616 | 4 | 600 | C Chain C, Crystal Structure Of Galectin 8 With Ndp52 Peptide |
PDB | 1iew_A | 0 | 4 | 616 | 4 | 600 | C Chain C, Crystal Structure Of Galectin 8 With Ndp52 Peptide |
PDB | 1iev_A | 0 | 4 | 616 | 4 | 600 | C Chain C, Crystal Structure Of Galectin 8 With Ndp52 Peptide |
PDB | 1ieq_A | 0 | 4 | 616 | 4 | 600 | C Chain C, Crystal Structure Of Galectin 8 With Ndp52 Peptide |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY265467 | 382 | 133 | 497 | 0 |
HO795479 | 322 | 306 | 613 | 0 |
HO784016 | 444 | 63 | 491 | 0 |
FC882555 | 316 | 133 | 434 | 0 |
HO784016 | 47 | 5 | 51 | 0.00001 |
Sequence Alignments (This image is cropped. Click for full image.) |
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