Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr5g076830.1 |
Family | GT4 |
Protein Properties | Length: 847 Molecular Weight: 96380.4 Isoelectric Point: 8.0211 |
Chromosome | Chromosome/Scaffold: 5 Start: 31774157 End: 31779342 |
Description | sucrose synthase 6 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT4 | 571 | 737 | 0 |
DKRKPIIFSMARLDVVKNLSGLVEWYGKNKRLRNLVNLVIVGGFFDPSKSKDREEMAEIKKMHDLIEKYQLKGQFRWIAAQTDRYRNGELYRCIADTKGA FVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPLNGDESSNKISDFFEKCKVD |
Full Sequence |
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Protein Sequence Length: 847 Download |
MAPTHALKRT NSIADNMPDA LRKSRYHMKK CFAKYLEKGR RIMKLHELME EVERTIDDIN 60 ERNYILEGNL GFILSSTQEA VVDPPYVAFA IRPNPGVWEY VRVNSEDLSV EPITPTDYLK 120 FKERVYDQKW ANDENAFEAD FGAFDIGIPK LTLSSSIGNG LHFVSKFLTS RTTGKLAKAQ 180 TIVDYLLKLN HHGESLMIND TLSSAAKLQM ALIVADVFLS AIPKDTSYQK FELRLKEWGF 240 EKGWGDNAGR VKETMRTLSE VLQAPDPVNL EIFFSRIPTI FKVVIFSVHG YFGQADVLGL 300 PDTGGQVVYI LDQVKALEEE LILRIKQQGL NYKPQILVVT RLIPDARGTK CHQEFEPIND 360 TKHSHILRVP FHTEKGILPQ WVSRFDIYPY LERFTQDATT KILDLMEGKP DLVIGNYTDG 420 NLVASLMARK LGITQATIAH ALEKTKYEDS DVKWKELDPK YHFSCQFMAD TVAMNSSDFI 480 ITSTYQEIAG SKDRPGQYES HAAFTLPGLC RVVSGINVFD PKFNIAAPGA DQSIYFPYTE 540 KDQRHSQFHP AIEDLLFNKV DNNEHIGYLA DKRKPIIFSM ARLDVVKNLS GLVEWYGKNK 600 RLRNLVNLVI VGGFFDPSKS KDREEMAEIK KMHDLIEKYQ LKGQFRWIAA QTDRYRNGEL 660 YRCIADTKGA FVQPALYEAF GLTVIEAMNC GLPTFATNQG GPAEIIVDGV SGFHIDPLNG 720 DESSNKISDF FEKCKVDPSY WNVISMAGLQ RINECYTWKI YANKLVNMGN TYTFWRQVNK 780 EQKEAKQRYI HMFYNFLFKN LAKNVPIPSD EPPKPVGKQP SLKQQGSSTR RSQSTLKRLD 840 LLYILG* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR02472 | sucr_P_syn_N | 8.0e-63 | 282 | 758 | 488 | + sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. | ||
cd03800 | GT1_Sucrose_synthase | 1.0e-116 | 282 | 765 | 484 | + This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. | ||
PLN00142 | PLN00142 | 0 | 1 | 815 | 815 | + sucrose synthase | ||
TIGR02470 | sucr_synth | 0 | 25 | 806 | 783 | + sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
pfam00862 | Sucrose_synth | 0 | 9 | 558 | 550 | + Sucrose synthase. Sucrose synthases catalyze the synthesis of sucrose from UDP-glucose and fructose. This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family pfam00534. |
Gene Ontology | |
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GO Term | Description |
GO:0005985 | sucrose metabolic process |
GO:0009058 | biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI27338.1 | 0 | 1 | 818 | 1 | 825 | unnamed protein product [Vitis vinifera] |
EMBL | CBI35298.1 | 0 | 9 | 829 | 10 | 834 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002267020.1 | 0 | 1 | 818 | 1 | 818 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002270861.1 | 0 | 9 | 829 | 10 | 834 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002327452.1 | 0 | 6 | 828 | 3 | 814 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3s29_H | 0 | 7 | 811 | 8 | 808 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 3s29_G | 0 | 7 | 811 | 8 | 808 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 3s29_F | 0 | 7 | 811 | 8 | 808 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 3s29_E | 0 | 7 | 811 | 8 | 808 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 3s29_D | 0 | 7 | 811 | 8 | 808 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO794519 | 802 | 7 | 807 | 0 |
BU103683 | 812 | 2 | 813 | 0 |
CX109054 | 597 | 107 | 703 | 0 |
FG227316 | 455 | 280 | 733 | 0 |
HO410243 | 621 | 189 | 805 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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