| Basic Information | |
|---|---|
| Species | Medicago truncatula |
| Cazyme ID | Medtr5g081720.1 |
| Family | GH17 |
| Protein Properties | Length: 441 Molecular Weight: 48918.5 Isoelectric Point: 7.9038 |
| Chromosome | Chromosome/Scaffold: 5 Start: 34010012 End: 34012155 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH17 | 26 | 342 | 0 |
| IGVTYSSTTRQDSPPPPSPDRITTAMQNLKLTHLRLEEPDPSIIRSLLYTNISLFLTIPNYLVTPIATNRSIARAWIYTHVLPFYPRAKITTISVGNAFT DVYPESINNLLPAISNVHISLRDLGIRKISVSTSFSFVTAVTSPFPPSSAAFQEIPGVNLIGPLLQFLSDTNSSFLINLYPYNLYRLRPEIPLGIALFQE HPFNFRDDFTTGVRYKNLFDIMVDAVVSAMALEGYETIPVIVTETGWPSSGSELDANSAYAEIYLKGLVKHLKSGAGTPLLKDGVKGVYLYELFDKEGAG NGRNWGILYPNGSTKYD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 441 Download |
| MISLTTFSLY LLLSLLPTTT TSLPTIGVTY SSTTRQDSPP PPSPDRITTA MQNLKLTHLR 60 LEEPDPSIIR SLLYTNISLF LTIPNYLVTP IATNRSIARA WIYTHVLPFY PRAKITTISV 120 GNAFTDVYPE SINNLLPAIS NVHISLRDLG IRKISVSTSF SFVTAVTSPF PPSSAAFQEI 180 PGVNLIGPLL QFLSDTNSSF LINLYPYNLY RLRPEIPLGI ALFQEHPFNF RDDFTTGVRY 240 KNLFDIMVDA VVSAMALEGY ETIPVIVTET GWPSSGSELD ANSAYAEIYL KGLVKHLKSG 300 AGTPLLKDGV KGVYLYELFD KEGAGNGRNW GILYPNGSTK YDKIDFSSGW KRLVNVGFIL 360 LLIVLQDPHE NMTAYDTFYS ESLCLYYIPL PGKIFILFGR IFTFCSAKTE HIGGLKCGSH 420 SHTLCMFGPK CSNINRLYPI * |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 0.002 | 262 | 336 | 83 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam00332 | Glyco_hydro_17 | 1.0e-54 | 55 | 346 | 297 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN71832.1 | 0 | 17 | 301 | 23 | 308 | hypothetical protein [Vitis vinifera] |
| RefSeq | NP_191137.1 | 0 | 26 | 365 | 31 | 376 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002276218.1 | 0 | 17 | 366 | 23 | 384 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002316237.1 | 0 | 45 | 365 | 62 | 386 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002530412.1 | 0 | 25 | 348 | 33 | 358 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 3e-38 | 42 | 346 | 13 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1ghr_A | 1e-37 | 26 | 336 | 1 | 297 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1aq0_B | 1e-37 | 26 | 336 | 1 | 297 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 1aq0_A | 1e-37 | 26 | 336 | 1 | 297 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 1ghs_B | 6e-37 | 42 | 342 | 13 | 303 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
