| Basic Information | |
|---|---|
| Species | Medicago truncatula |
| Cazyme ID | Medtr5g081790.1 |
| Family | AA1 |
| Protein Properties | Length: 433 Molecular Weight: 48396.8 Isoelectric Point: 9.0528 |
| Chromosome | Chromosome/Scaffold: 5 Start: 34041618 End: 34043522 |
| Description | Laccase/Diphenol oxidase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 163 | 421 | 0 |
| EKIIILGQTTNVLLTANQPIGKYLIAITPFMDAPIGFDNLSSIATLRYKGIPPYTKTILTNIPPLNATPITKTFTDSLRSLNSKTYPTRVSLTIDHSLLF AITVGLNPCDTCITDNKLVSAINNITFLMPTVSLLQANYYNIKGVFTDDFPSKPPMVFDYTGTDQPANLHTDNGTKVYRLNFNSSVQIVLQGTAMIAPEN HPFHLHGFNFFVVGQGLGNFDPEKDPLRFNLVDPIERNTLSVPNNGWIAIRFRADNPGS | |||
| Full Sequence |
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| Protein Sequence Length: 433 Download |
| MEPRFLAIFL VALSSPLFVQ SLVRHYNFSV VMKNETKLCS TKSFVSVNGK FPGPTLYARE 60 DDTVIVTVTN YVEHNVTIHY VVSDICVHGI KQLRTCWSDE PAYVTQCPIQ TGQSFVYNFT 120 ITGQRGTLLW HAHITWLRAT MHGAIVILPK RGTPYPFPKP DKEKIIILGQ TTNVLLTANQ 180 PIGKYLIAIT PFMDAPIGFD NLSSIATLRY KGIPPYTKTI LTNIPPLNAT PITKTFTDSL 240 RSLNSKTYPT RVSLTIDHSL LFAITVGLNP CDTCITDNKL VSAINNITFL MPTVSLLQAN 300 YYNIKGVFTD DFPSKPPMVF DYTGTDQPAN LHTDNGTKVY RLNFNSSVQI VLQGTAMIAP 360 ENHPFHLHGF NFFVVGQGLG NFDPEKDPLR FNLVDPIERN TLSVPNNGWI AIRFRADNPG 420 SKKNHFFFLS NF* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR03388 | ascorbase | 8.0e-25 | 23 | 168 | 148 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| TIGR03388 | ascorbase | 2.0e-33 | 169 | 420 | 266 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| pfam07732 | Cu-oxidase_3 | 2.0e-43 | 29 | 152 | 126 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| TIGR03389 | laccase | 3.0e-76 | 23 | 170 | 148 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| TIGR03389 | laccase | 2.0e-127 | 157 | 420 | 270 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAC14719.1 | 0 | 157 | 420 | 248 | 513 | laccase [Populus trichocarpa] |
| RefSeq | XP_002311202.1 | 0 | 8 | 170 | 10 | 165 | laccase [Populus trichocarpa] |
| RefSeq | XP_002311202.1 | 0 | 169 | 420 | 263 | 514 | laccase [Populus trichocarpa] |
| RefSeq | XP_002316233.1 | 0 | 8 | 170 | 9 | 164 | laccase 3 [Populus trichocarpa] |
| RefSeq | XP_002316233.1 | 0 | 157 | 420 | 248 | 513 | laccase 3 [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 1e-19 | 21 | 157 | 1 | 131 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1asq_B | 1e-18 | 283 | 420 | 363 | 501 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1asq_A | 1e-19 | 21 | 157 | 1 | 131 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1asq_A | 1e-18 | 283 | 420 | 363 | 501 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1asp_B | 1e-19 | 21 | 157 | 1 | 131 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Signal Peptide | ||||
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| Cleavage Site | ||||
| 21 | ||||
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| CU572569 | 246 | 175 | 420 | 0 |
| DT472855 | 258 | 157 | 412 | 0 |
| DY280775 | 263 | 159 | 417 | 0 |
| JG229583 | 237 | 184 | 420 | 0 |
| EE647581 | 258 | 165 | 420 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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