| Basic Information | |
|---|---|
| Species | Medicago truncatula |
| Cazyme ID | Medtr5g083360.1 |
| Family | AA1 |
| Protein Properties | Length: 568 Molecular Weight: 62571 Isoelectric Point: 6.672 |
| Chromosome | Chromosome/Scaffold: 5 Start: 34978821 End: 34982493 |
| Description | laccase 5 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 21 | 549 | 0 |
| AKVHEHEFVVQATPVKRLCNTQMSITVNGQFPGPTLEINNGDTLVVKVINKARYNVTIHWHGVRQIRTGWADGPEFVTQCPIRPGESYTYRFTINGQEGT LWWHAHSSWLRATVYGALIIHPKEGDAYPFTKPKRETPILLGEWWDANPIDVVRQATQTGAAPNISDAYTINGQPGDLYKCSSKGTTIVPIDSGETNLIR VINAALNQPLFFTIANHKLTVVGADASYVKPFTTNVLMLGPGQTTDVLIQGDQPPSRYYIAGRAYQSAQNAAFDNTTTTAILEYKSSPCPAKGGANIRPI MPSLPAYNDTNTVTSFSKSFRSLRNVEVPNEIDEDLFFTIGLGLNNCPSNFNSNQCQGPNGTRFTSSMNNVSFVLPSNFSILQAHKLGVQGVFTTDFPTK PPVQFDYTGNVSRSLWQPIQGTKVTKLRFGSRVQVVLQDTSIVTPENHPIHLHGYDFYIVAEGFGNFDPKKDASKFNLVDPPMRNTVAVPVNGWAVIRFV ADNPGVWIMHCHLDVHIGWGLATVFLVED | |||
| Full Sequence |
|---|
| Protein Sequence Length: 568 Download |
| MEVFNTIFLA IFLLFASLAN AKVHEHEFVV QATPVKRLCN TQMSITVNGQ FPGPTLEINN 60 GDTLVVKVIN KARYNVTIHW HGVRQIRTGW ADGPEFVTQC PIRPGESYTY RFTINGQEGT 120 LWWHAHSSWL RATVYGALII HPKEGDAYPF TKPKRETPIL LGEWWDANPI DVVRQATQTG 180 AAPNISDAYT INGQPGDLYK CSSKGTTIVP IDSGETNLIR VINAALNQPL FFTIANHKLT 240 VVGADASYVK PFTTNVLMLG PGQTTDVLIQ GDQPPSRYYI AGRAYQSAQN AAFDNTTTTA 300 ILEYKSSPCP AKGGANIRPI MPSLPAYNDT NTVTSFSKSF RSLRNVEVPN EIDEDLFFTI 360 GLGLNNCPSN FNSNQCQGPN GTRFTSSMNN VSFVLPSNFS ILQAHKLGVQ GVFTTDFPTK 420 PPVQFDYTGN VSRSLWQPIQ GTKVTKLRFG SRVQVVLQDT SIVTPENHPI HLHGYDFYIV 480 AEGFGNFDPK KDASKFNLVD PPMRNTVAVP VNGWAVIRFV ADNPGVWIMH CHLDVHIGWG 540 LATVFLVEDG EGLLESIEAP PEDLPLC* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07732 | Cu-oxidase_3 | 5.0e-55 | 29 | 145 | 119 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| PLN02191 | PLN02191 | 1.0e-73 | 39 | 564 | 557 | + L-ascorbate oxidase | ||
| PLN02604 | PLN02604 | 4.0e-83 | 39 | 545 | 544 | + oxidoreductase | ||
| TIGR03388 | ascorbase | 2.0e-95 | 39 | 545 | 539 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| TIGR03389 | laccase | 0 | 22 | 567 | 550 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM54731.1 | 0 | 20 | 567 | 33 | 589 | diphenol oxidase laccase [Glycine max] |
| GenBank | ABK92474.1 | 0 | 17 | 567 | 2 | 550 | unknown [Populus trichocarpa] |
| EMBL | CBI25418.1 | 0 | 18 | 567 | 28 | 577 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002315131.1 | 0 | 1 | 567 | 1 | 575 | laccase 90c [Populus trichocarpa] |
| RefSeq | XP_002520796.1 | 0 | 20 | 567 | 31 | 577 | laccase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 39 | 545 | 19 | 521 | A Chain A, Unusual Structural Features In The Parallel Beta-Helix In Pectate Lyases |
| PDB | 1asq_A | 0 | 39 | 545 | 19 | 521 | A Chain A, Unusual Structural Features In The Parallel Beta-Helix In Pectate Lyases |
| PDB | 1asp_B | 0 | 39 | 545 | 19 | 521 | A Chain A, Unusual Structural Features In The Parallel Beta-Helix In Pectate Lyases |
| PDB | 1asp_A | 0 | 39 | 545 | 19 | 521 | A Chain A, Unusual Structural Features In The Parallel Beta-Helix In Pectate Lyases |
| PDB | 1aso_B | 0 | 39 | 545 | 19 | 521 | A Chain A, Unusual Structural Features In The Parallel Beta-Helix In Pectate Lyases |
