CAZyme Information

Basic Information
SpeciesMedicago truncatula
Cazyme IDMedtr6g008850.1
FamilyGH38
Protein PropertiesLength: 1199 Molecular Weight: 137895 Isoelectric Point: 7.5528
ChromosomeChromosome/Scaffold: 6 Start: 1943494 End: 1950594
Descriptiongolgi alpha-mannosidase II
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH382035270
  FFVVPHSHNDPGWKLTVEEYYDRLDPRRKFIWEEMSYLERWWRDTTDVMKETFINLVKNGQLEIVGGGWVMNDEANSHYYAIIEQIAEGNMWLNDTIGFV
  PRNNWAIDPFGYSSTMAYLLRRMGFDNMLIQRTHYELKKELAWHKNLEYVWRQSWDAEETTDIFVHMMPFYSYDIPHTCGPEPAICCQFDFARMQGFVYE
  QCPWGQYPVETTQENVQERALKLLDQYKKKSTLYRTNTLLVPLGDDFRYINVEEAEAQFRNYQMLFDYINSNPSLNTEAKFGTLEDYFTVVRDEAERINY
  SSPGVVGSGLVEGFPSLSGDFFTYA
Full Sequence
Protein Sequence     Length: 1199     Download
MAFSSRRGGN WAQSILPSSN PKSKQPRKSK RRTLVKDFIF SNFFIIGLII SLLFFLIVLL    60
RFGVPKPITT HFRTRTSRFR KPKKLSLNGS STIFGGFASV DLTTKGLYDK IEFLDVDGGA    120
WKQGWSVSYR GDEWDNEKLK VFVVPHSHND PGWKLTVEEY YDRQSRHILD TIVETLSKLT    180
VEEYYDRDTI VQNSWQGFCL LKFFVVPHSH NDPGWKLTVE EYYDRLDPRR KFIWEEMSYL    240
ERWWRDTTDV MKETFINLVK NGQLEIVGGG WVMNDEANSH YYAIIEQIAE GNMWLNDTIG    300
FVPRNNWAID PFGYSSTMAY LLRRMGFDNM LIQRTHYELK KELAWHKNLE YVWRQSWDAE    360
ETTDIFVHMM PFYSYDIPHT CGPEPAICCQ FDFARMQGFV YEQCPWGQYP VETTQENVQE    420
RALKLLDQYK KKSTLYRTNT LLVPLGDDFR YINVEEAEAQ FRNYQMLFDY INSNPSLNTE    480
AKFGTLEDYF TVVRDEAERI NYSSPGVVGS GLVEGFPSLS GDFFTYADRQ QDYWSGYYVS    540
RPFFKAVDRV LEQTLRATEM MVALTLGCCR RAHCEKFAMA FSYKLTAARR NLALFQHHDG    600
VTGTAKDHVV MDYGTRMHTS LQDLQIFMSK GIEALLGIRY DKLDQSPSQY EPAIVRSKYD    660
AQPVHKVISI RDGTYQSVVF YNPLEQTREE VVMVVVDRPD ITVVDSNMTC VQSQISPELR    720
YHNSKIFTGK HRVYWKVLVP AMGLETYYIS NGFVGCEKAE PAKLKLFSKA SSVTCPSPYS    780
CGKIEGDVAE IENQHQKLTF NVRYGLLQKI TLKNSSPSIV NEEVGLYASS GGAYLFKPSG    840
EAQPIIEGDG LLLISEGPLL QEVFSYPKTA WDKSPISHST RIYNSEDAVQ GFVVEKEYHV    900
ELIDRHFNDR ELIVRYKTDV DSKKVFYSDL NGFQMSRRET YDKIPLQGNY YPMPSLAFIQ    960
ASNGRRFSVH SRQSLGVASL QNGWLEIMLD RRLVRDDGRG LGQGVMDNRV MNVVFHLTVE    1020
SNISTTSNSV SSSYPLNPSL LSHRVGSHLN YPLHAFISKK SQELSVKPPP RSFSPLATPL    1080
PCDLHIVNFK VPKPLKFLQQ PHESSRFVLI LHRRHYDSSY CRKGRSSQCT RLANDPVNLF    1140
SMFKDITASK VKATSLNLLH EDPEIIGFTE QFADVAQEGH VSISPMEIQA YRLELRPQ*     1200
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd00451GH38N_AMII_euk2.0e-100139473336+
cd11667GH38N_Man2A27.0e-142139538400+
cd11666GH38N_Man2A12.0e-142201538352+
PLN02701PLN02701010011961106+
cd10809GH38N_AMII_GMII_SfManIII_like0138538401+
Gene Ontology
GO TermDescription
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004559alpha-mannosidase activity
GO:0005975carbohydrate metabolic process
GO:0006013mannose metabolic process
GO:0008270zinc ion binding
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
EMBLCBI35021.10110451963unnamed protein product [Vitis vinifera]
RefSeqNP_196999.10111198221172GMII (GOLGI ALPHA-MANNOSIDASE II); alpha-mannosidase [Arabidopsis thaliana]
RefSeqXP_002276468.101119711149PREDICTED: hypothetical protein [Vitis vinifera]
RefSeqXP_002438145.10561197711178hypothetical protein SORBIDRAFT_10g008770 [Sorghum bicolor]
RefSeqXP_002517418.1011198191179mannosidase alpha class 2a, putative [Ricinus communis]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB1ps3_A099105740933A Chain A, Golgi Alpha-mannosidase Ii In Complex With Kifunensine
PDB1hxk_A099105710903A Chain A, Golgi Alpha-Mannosidase Ii In Complex With Deoxymannojirimicin
PDB1hww_A099105710903A Chain A, Golgi Alpha-Mannosidase Ii In Complex With Deoxymannojirimicin
PDB1hty_A099105710903A Chain A, Golgi Alpha-Mannosidase Ii
PDB3eju_A099105740933A Chain A, Golgi Alpha-Mannosidase Ii
Transmembrane Domains
StartEnd
3860
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
HO7891223211444640
BG6446672535618130
FL7143862732745460
DY9390752994627600
CB6620862813185980
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_002_00345.1.265.483Aquca_002_00345.1.265.483Aquca_006_00230.1Aquca_006_00257.5Aquca_006_00257.9
Aquca_006_00257.8Aquca_006_00257.7Aquca_006_00257.6Aquca_006_00257.4Aquca_006_00257.3
Aquca_006_00257.2Aquca_006_00257.1Aquca_043_00016.7Aquca_043_00016.8Aquca_043_00016.6
Aquca_043_00016.5Aquca_043_00016.4Aquca_043_00016.3Aquca_043_00016.2Aquca_043_00016.1
Aquca_043_00019.2Aquca_043_00019.1Aquca_043_00018.1Aquca_056_00071.1Aquca_002_00345.1.162.261
Aquca_002_00345.1.162.261
Arabidopsis lyrata488339488225497001484445
Arabidopsis thalianaAT5G14950.1AT5G66150.1AT5G13980.3AT5G13980.2AT5G13980.1
AT3G26720.2AT3G26720.1
Brachypodium distachyonBradi1g44550.1Bradi3g21117.1Bradi4g17327.1Bradi4g17317.1
Brassica rapaBra023496Bra006275Bra037183Bra006227Bra025225
Carica papayaevm.model.supercontig_6.275evm.model.supercontig_70.70evm.model.supercontig_2646.1evm.TU.contig_36966.1evm.model.supercontig_70.69
Capsella rubellaCarubv10000075mCarubv10002909mCarubv10027738mCarubv10016625m
Citrus clementinaCiclev10014083mCiclev10017635mCiclev10024829mCiclev10024800mCiclev10030627m
Ciclev10014156mCiclev10014160mCiclev10014123m
Citrus sinensisorange1.1g002547morange1.1g002518morange1.1g002134morange1.1g001061morange1.1g015028m
orange1.1g002366morange1.1g004057morange1.1g001910morange1.1g001850morange1.1g002764m
orange1.1g002170morange1.1g002162morange1.1g002383morange1.1g001963morange1.1g001813m
orange1.1g002938morange1.1g002542morange1.1g002064morange1.1g002056morange1.1g002046m
orange1.1g002036m
Cucumis sativusCucsa.339310.1Cucsa.043720.1Cucsa.188400.2Cucsa.188400.1
Eucalyptus grandisEucgr.J02166.1Eucgr.L01536.1Eucgr.J02456.1Eucgr.K02195.1Eucgr.J02455.3
Eucgr.J02455.2Eucgr.J02455.1Eucgr.I01600.1Eucgr.G01931.1Eucgr.J02460.1
Eucgr.J02454.1Eucgr.L01537.1Eucgr.J02457.1Eucgr.J02459.2Eucgr.J02459.1
Fragaria vescamrna28330.1-v1.0-hybridmrna14585.1-v1.0-hybridmrna01394.1-v1.0-hybrid.37.348mrna01394.1-v1.0-hybrid.37.348mrna06416.1-v1.0-hybrid.39.351
mrna06416.1-v1.0-hybrid.39.351mrna14589.1-v1.0-hybrid.71.344
Glycine maxGlyma13g04761.3Glyma13g04761.2Glyma19g01890.1Glyma13g04761.1Glyma02g05240.2
Glyma02g05240.1Glyma16g23600.1Glyma01g36980.1Glyma06g17270.1Glyma04g37790.1
Glyma19g27660.2Glyma19g27660.1Glyma16g05240.2Glyma16g05240.1
Gossypium raimondiiGorai.001G258600.2Gorai.001G258600.1Gorai.006G027500.1Gorai.003G008600.2Gorai.003G008600.1
Gorai.006G000300.3Gorai.006G000300.2Gorai.006G000300.1Gorai.012G082700.6Gorai.012G082700.9
Gorai.012G082700.8Gorai.012G082700.7Gorai.012G082700.5Gorai.012G082700.4Gorai.012G082700.3
Gorai.012G082700.2Gorai.012G082700.10Gorai.012G082700.1Gorai.003G116600.2Gorai.003G116600.1
Linum usitatissimumLus10014507Lus10015337.248.571Lus10015337.248.571Lus10032179Lus10039457
Lus10012578Lus10035111Lus10012577Lus10036074Lus10025960
Lus10014259Lus10041516Lus10015337.158.248Lus10015337.158.248
Malus domesticaMDP0000888429MDP0000267909MDP0000250936MDP0000139458MDP0000274501
MDP0000274500MDP0000409920MDP0000163211MDP0000657082MDP0000211018
Manihot esculentacassava4.1_000571mcassava4.1_001602mcassava4.1_000993mcassava4.1_000971mcassava4.1_000869m
cassava4.1_001123mcassava4.1_001106m
Medicago truncatulaMedtr4g071680.1Medtr8g075330.1Medtr7g084040.1Medtr3g098650.2Medtr3g098650.1
Medtr7g084030.1
Mimulus guttatusmgv1a000435mmgv1a000658mmgv1a000852mmgv1a000690m
Oryza sativaLOC_Os06g13650.2LOC_Os06g13650.1LOC_Os06g13650.3LOC_Os11g32260.2LOC_Os11g32260.1
LOC_Os10g05069.2LOC_Os10g05069.1LOC_Os10g05069.3
Panicum virgatumPavirv00027286mPavirv00014532mPavirv00024149mPavirv00025946mPavirv00065120m
Physcomitrella patensPp1s10_34V6.1Pp1s77_136V6.1Pp1s129_147V6.1
Phaseolus vulgarisPhvul.004G022500.1Phvul.003G264400.1Phvul.001G084400.1Phvul.002G107300.1Phvul.001G084700.1
Phvul.009G161600.1
Picea abiesMA_10434251g0010MA_879613g0010MA_4107059g0010
Populus trichocarpaPotri.017G073900.2Potri.017G073900.1Potri.001G350400.2Potri.001G350400.1Potri.014G143600.1
Potri.014G143600.2Potri.007G056300.1Potri.002G238200.2Potri.002G238200.1Potri.012G106500.2
Potri.012G106500.1
Prunus persicappa000458mppa021513mppa000707mppa000755mppa000717m
Ricinus communis29822.m00342029868.m00034130131.m00698230131.m00698130147.m014412
Setaria italicaSi005719mSi038673mSi025964mSi034056mSi025881m
Selaginella moellendorffii104910154366266756410022178241
Sorghum bicolorSb10g008770.1Sb01g026405.1Sb05g019600.1Sb01g026390.1
Thellungiella halophilaThhalv10012487mThhalv10012612mThhalv10012546mThhalv10003575mThhalv10003577m
Vitis viniferaGSVIVT01032586001GSVIVT01018752001GSVIVT01032988001GSVIVT01008340001GSVIVT01008642001
GSVIVT01032989001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny  (This image is cropped. Click for full image.)