Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr6g081120.1 |
Family | GT4 |
Protein Properties | Length: 1320 Molecular Weight: 151045 Isoelectric Point: 8.2492 |
Chromosome | Chromosome/Scaffold: 6 Start: 18468705 End: 18474953 |
Description | Disease resistance protein (TIR-NBS-LRR class) family |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT4 | 1120 | 1272 | 2.90069e-42 |
LEDKKKPIIFSMARLDKVKNISGLVEWFAKNKRLRSLVNLVIVGGFFDPSKSKDSKETEEIKKIWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGL TVIEAMNCGLPTFATNQGGPAEIIVEGVSGFHIDPHNGDESINKISEFFENYT |
Full Sequence |
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Protein Sequence Length: 1320 Download |
MAMQSPPSSS SFSYAFTYQV FLSFRGTDTR HGFTGNLYKA LTDKGIKTFI DDNDLQRGDE 60 ITPSLLKAIE ESRIFIPVFS INYATSKFCL DELVHIIHCY KTEGRLVLPV FFGVDPTNVR 120 HHTGRYGEAL AGHEKRFQND KNNMERLHQW KLALTQAANL SGYHSSHGYE YKFIGDIVKY 180 ISNKISRQPL HVANYPVGLQ SRVQHVKSLL DEGSDDGVHM VGLYGTGGLG KSTLGKAIYN 240 FISDQFECSC FLENVRENSA SNKLKHLQEE LLLKTLQQKT KLGSVSEGIP YIKERLHTKK 300 TLLILDDVDD MKQLHALAGG PDWFGRGSRV IITTRDKHLL RSHGIKSTHE VKGLYGTEAL 360 ELLRWMAFKN NKVPSSYEDV LNRAVSYASG LPLVLEIVGS NLFGKTIEEW KGTLDGYEKI 420 PNKKIHEILK VSYDALEEEQ QSVFLDIACC FKGCGWKEFE DILRAHYGHC IKHHLGVLAE 480 KSLVKISSTS YSGSINHVTL HDFIEDMGKE VVRQESPKEP GERSRLWCQD DIVNVLKENT 540 GTRKIEMIYM NFPSEEFVID KKGKAFKKMT RLKTLIIENV HFSKGLKYLP SSLRVLKLRG 600 CLSESLLSCS LSKKFQNMKI LTLDRCEYLT HIPDVSGLQN LEKFSFEYCE NLITIHNSIG 660 HLNKLERLSA NGCSKLERFP PLGLASLNEL NISYCESLKS FPKLLCKMTN MKTIWLQKTS 720 IRELPSSFQN LNELFQLTLW ECGMLRFPKQ NDQMYSIVFS KVTNLVLNNC KLSDECLPIF 780 LKWCVNVKLL DLSRNNFKLI PECLSECHLL NNLILDNCKS LEEIRGIAPN LERLSAMGCK 840 SLSSSSRRML LSQKLNEAGC IISFPNFSDG IPDWFEHQSR GDTISFWFRK KIPSNISVIL 900 FPGCMSTPQL CLFVNGYKCF PCNYLLWGFV LFEILESEHS FLFNLKLEEE ITHLCRLSEM 960 DEAILRNEWI HVELNFVKNV WNKSIHVTEK LSSAQIGIHV RMEKSNAEEN VIFTDPHRGC 1020 RNTSLSQFEP PLKKQRLVEV VVSETEIWQQ QYLALVSGMQ NLVLTETKEE HHLMAHRSHR 1080 ICGLFEKALD KDMLYSSVVL FRCYIRHELY IAYDPSAGFL EDKKKPIIFS MARLDKVKNI 1140 SGLVEWFAKN KRLRSLVNLV IVGGFFDPSK SKDSKETEEI KKIWIAAQTD RYRNGELYRC 1200 IADTKGAFVQ PALYEAFGLT VIEAMNCGLP TFATNQGGPA EIIVEGVSGF HIDPHNGDES 1260 INKISEFFEN YTWKIYANKV LNMGSIYGFW RKLNKEQKLA KERYIQMFYK LQFRNLVSL* 1320 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01582 | TIR | 7.0e-36 | 20 | 150 | 133 | + TIR domain. The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88, interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions, and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated, TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn, these associate with various kinases to set off signalling cascades. | ||
cd03800 | GT1_Sucrose_synthase | 5.0e-48 | 1090 | 1281 | 231 | + This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. | ||
TIGR02470 | sucr_synth | 3.0e-95 | 1114 | 1316 | 239 | + sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
PLN03210 | PLN03210 | 2.0e-109 | 16 | 918 | 957 | + Resistant to P. syringae 6; Provisional | ||
PLN00142 | PLN00142 | 3.0e-127 | 1118 | 1317 | 236 | + sucrose synthase |
Gene Ontology | |
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GO Term | Description |
GO:0004888 | transmembrane signaling receptor activity |
GO:0005515 | protein binding |
GO:0005524 | ATP binding |
GO:0005622 | intracellular |
GO:0006915 | apoptotic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAL56987.1 | 0 | 20 | 1053 | 18 | 1093 | AF327903_1 functional candidate resistance protein KR1 [Glycine max] |
GenBank | AAO23074.1 | 0 | 8 | 856 | 2 | 894 | R 10 protein [Glycine max] |
GenBank | AAO23076.1 | 0 | 8 | 856 | 2 | 894 | R 1 protein [Glycine max] |
GenBank | AAO23077.1 | 0 | 8 | 856 | 2 | 890 | R 8 protein [Glycine max] |
GenBank | AAO92748.1 | 0 | 8 | 1017 | 2 | 1051 | candidate disease-resistance protein SR1 [Glycine max] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3s29_H | 0 | 1120 | 1318 | 567 | 800 | A Chain A, Glactose Oxidase C383s Mutant Identified By Directed Evolution |
PDB | 3s29_G | 0 | 1120 | 1318 | 567 | 800 | A Chain A, Glactose Oxidase C383s Mutant Identified By Directed Evolution |
PDB | 3s29_F | 0 | 1120 | 1318 | 567 | 800 | A Chain A, Glactose Oxidase C383s Mutant Identified By Directed Evolution |
PDB | 3s29_E | 0 | 1120 | 1318 | 567 | 800 | A Chain A, Glactose Oxidase C383s Mutant Identified By Directed Evolution |
PDB | 3s29_D | 0 | 1120 | 1318 | 567 | 800 | A Chain A, Glactose Oxidase C383s Mutant Identified By Directed Evolution |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CB893709 | 256 | 283 | 538 | 0 |
HO782689 | 393 | 149 | 537 | 0 |
HO782689 | 85 | 71 | 151 | 0 |
AW684769 | 196 | 670 | 865 | 0 |
AW684769 | 32 | 861 | 892 | 0.0000000004 |
Sequence Alignments (This image is cropped. Click for full image.) |
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