Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr6g081200.1 |
Family | GT4 |
Protein Properties | Length: 399 Molecular Weight: 45192.6 Isoelectric Point: 8.8297 |
Chromosome | Chromosome/Scaffold: 6 Start: 18501778 End: 18505679 |
Description | sucrose synthase 6 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT4 | 87 | 240 | 4.9e-37 |
EDKKKPIIFSMARLDKVKNISGLVEWFAKNKRLRSLVNLVIVGGFFDPSKSKDSEETEEIKKIWIAAQTDQYRNGELYRCIADTTGAFVQPALYEAFGLT VIAAMNCGLPTFATNQSTFGPAEIIIEGVSGFHIDPHNGDESINKISEFFENYT |
Full Sequence |
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Protein Sequence Length: 399 Download |
MKNMMNPDED HHEHNNILMF IRDQNVCPEF QVKACGTQDI WHNTIGHPTT VNKDCKVRDL 60 RGYLKHLSGN SHRIVGSGLA HIGGFLEDKK KPIIFSMARL DKVKNISGLV EWFAKNKRLR 120 SLVNLVIVGG FFDPSKSKDS EETEEIKKIW IAAQTDQYRN GELYRCIADT TGAFVQPALY 180 EAFGLTVIAA MNCGLPTFAT NQSTFGPAEI IIEGVSGFHI DPHNGDESIN KISEFFENYT 240 WKIYANKVLN MGSIYGFWRK LNKEQKLAKE RYIQMFYNLQ FRNFARKVPI PKEVSQESQP 300 MSTTPTKKAE AKAEATSKGH DAAQEKAEVP QTYLATLPPK IESQPTSRFI GESSSKELAA 360 KQSGDLYSGL RWLLPGIAFM FIIHYLSKYL EHLFTRDQ* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR02472 | sucr_P_syn_N | 1.0e-22 | 85 | 226 | 155 | + sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. | ||
pfam00534 | Glycos_transf_1 | 3.0e-26 | 90 | 238 | 151 | + Glycosyl transferases group 1. Mutations in this domain of human PIGA lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family. | ||
cd03800 | GT1_Sucrose_synthase | 6.0e-43 | 75 | 249 | 203 | + This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. | ||
TIGR02470 | sucr_synth | 6.0e-100 | 84 | 289 | 242 | + sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
PLN00142 | PLN00142 | 7.0e-136 | 81 | 293 | 249 | + sucrose synthase |
Gene Ontology | |
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GO Term | Description |
GO:0009058 | biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI35298.1 | 0 | 84 | 331 | 568 | 851 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002270861.1 | 0 | 84 | 331 | 568 | 851 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002327452.1 | 0 | 81 | 313 | 552 | 814 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002526290.1 | 0 | 81 | 318 | 565 | 835 | sucrose synthase, putative [Ricinus communis] |
RefSeq | XP_002532791.1 | 0 | 81 | 312 | 534 | 796 | sucrose synthase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3s29_H | 0 | 86 | 293 | 567 | 807 | A Chain A, Crystal Structure Of Rbcx Point Mutant Y17aY20L |
PDB | 3s29_G | 0 | 86 | 293 | 567 | 807 | A Chain A, Crystal Structure Of Rbcx Point Mutant Y17aY20L |
PDB | 3s29_F | 0 | 86 | 293 | 567 | 807 | A Chain A, Crystal Structure Of Rbcx Point Mutant Y17aY20L |
PDB | 3s29_E | 0 | 86 | 293 | 567 | 807 | A Chain A, Crystal Structure Of Rbcx Point Mutant Y17aY20L |
PDB | 3s29_D | 0 | 86 | 293 | 567 | 807 | A Chain A, Crystal Structure Of Rbcx Point Mutant Y17aY20L |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CX545522 | 246 | 81 | 290 | 0 |
DV463229 | 245 | 81 | 289 | 0 |
DW119834 | 254 | 81 | 298 | 0 |
JG542863 | 242 | 81 | 286 | 0 |
GO872338 | 256 | 81 | 300 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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