| Basic Information | |
|---|---|
| Species | Medicago truncatula |
| Cazyme ID | Medtr7g005950.1 |
| Family | GT48 |
| Protein Properties | Length: 1960 Molecular Weight: 225917 Isoelectric Point: 9.3718 |
| Chromosome | Chromosome/Scaffold: 7 Start: 611252 End: 631744 |
| Description | glucan synthase-like 12 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT48 | 1059 | 1815 | 0 |
| VPSNLEARRRISFFSNSLFMDMPVAPKVRNMLSFSILTPYYTEEVLFSLLDLDSPNEDGVSILFYLQKIFPDEWTNFLQRVKCSSEEELKGNESEELEEE LRLWASYRGQTLTRTVRGMMYYRKALELQAFLDMAKDEDLMEGYKAMENSDDNSRGERSLWTQCQAVADMKFTYVVSCQQYGIDKRSGSPRAHDILRLMT RYPSLRVAYIDEVEEPIKNSKKKINKVYYSCLVKAMPKSSSSSEPEQNLDQVIYKIKLPGPAILGEGKPENQNHAIIFTRGEGLQTIDMNQDNYMEEALK MRNLLQEFLKKHDGVRFPSILGLREHIFTGSVSSLAWFMSNQETSFVTIGQRLLANPLRVRFHYGHPDVFDRLFHLTRGGVSKASKVINLSEDIFAGFNS TLREGSVTHHEYIQVGKGRDVGLNQISMFEAKIANGNGEQTLSRDVYRLGHRFDFFRMLSCYFTTVGFYFSTLITVLTVYIFLYGRLYLVLSGLEEGLSA QKAIRDNKPLQVALASQSFVQIGFLMALPMLMEIGLERGFRTALSEFILMQLQLAPVFFTFSLGTKTHYFGRTLLHGGAKYRPTGRGFVVFHAKFADNYR LYSRSHFVKGIELLVLLVVYEIFSHSYRSAVAYILITVSMWFMVGTWLFAPFLFNPSGFEWQKIVDDWTDWNKWISNRGGIGVPPEKSWESWWEEEQDHL QYSGIRGIIVEILLSLRFFIYQYGLVYHLNITKKGSKSFLVYGISWLVIFVILFVMK | |||
| Full Sequence |
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| Protein Sequence Length: 1960 Download |
| MSSSSSRGPT PSEPPPRRLV RTQTAGNLGE SIFDSEVVPS SLVEIAPILR VANEVEKTHP 60 RVAYLCRFYA FEKAHRLDPT SSGRGVRQFK TALLQRLERE NDPTLKGRVK KSDAREMQSF 120 YQHYYKKYIQ ALQNAADKAD RAQLTKAYQT ANVLFEVLKA VNMTQSMEVD REILETQDKV 180 AEKTEILVPF NILPLDPDSA NQAIMKFPEI QAAVYALRNT RGLPWPNDYK KKKDEDILDW 240 LGSMFGFQKH NVANQREHLI LLLANVHIRQ FPNPDQQPKL DECALTEVMK KLFKNYKKWC 300 KYLDRKSSLW LPTIQQEVQQ RKLLYMGLYL LIWGEAANLR FMPECLCYIY HHMAFELYGM 360 LAGNVSPMTG ENIKPAYGGE DEAFLRKVVT PIYNVIAEEA KKSKRGRSKH SQWRNYDDLN 420 EYFWSADCFR LGWPMRADAD FFCLPAERVV FDKSNDDKPP NRDGWFGKVN FVEIRSFWHL 480 FRSFDRMWSF FILCLQAMII VAWNGSGDPT VIFHGDVFKK VLSVFITAAI LKFGQAVLGV 540 ILSWKARRSM SLYVKLRYIL KVISAAAWVI LLSVTYAYTW DNPPGFAETI KSWFGSNSSA 600 PSLFIVAVVV YLSPNMLAAI FFMFPFIRRY LERSNYRIVM LMMWWSQPRL YVGRGMHEST 660 FSLFKYTVFW VLLLFTKLAF SYYIEIKPLV GPTKAIMKVK ISTFQWHEFF PHGTRNNIGV 720 VVVLWAPIIL VYFMDTQIWY AIFSTLFGGI YGAFRRLGEI RTLGMLRSRF QSLPGAFNAS 780 LIPEESTDEP RKKGLKATLS RRFTEIPSNK GKKAARFAQL WNQIITSFRE EDLINDSEMD 840 LLLVPYWADT QLDLIQWPPF LLASKIPIAL DMAKDSNGKD RELTKRIEAD NYMSCAVREC 900 YASFKSIIMH LVRGEREKPF IEYMFGEVDS HIEAGTLIKE FRMSALPSLY GQFVQLIQYL 960 LVNNQKDRDQ VVILFQDMLE VVTRDIMMED QDQIFSLIDS SHGGVGHEGM FPLEPEPHHQ 1020 LFASEGAISF PIEPVTAAWT EKIKRLFLLL TTKESAMDVP SNLEARRRIS FFSNSLFMDM 1080 PVAPKVRNML SFSILTPYYT EEVLFSLLDL DSPNEDGVSI LFYLQKIFPD EWTNFLQRVK 1140 CSSEEELKGN ESEELEEELR LWASYRGQTL TRTVRGMMYY RKALELQAFL DMAKDEDLME 1200 GYKAMENSDD NSRGERSLWT QCQAVADMKF TYVVSCQQYG IDKRSGSPRA HDILRLMTRY 1260 PSLRVAYIDE VEEPIKNSKK KINKVYYSCL VKAMPKSSSS SEPEQNLDQV IYKIKLPGPA 1320 ILGEGKPENQ NHAIIFTRGE GLQTIDMNQD NYMEEALKMR NLLQEFLKKH DGVRFPSILG 1380 LREHIFTGSV SSLAWFMSNQ ETSFVTIGQR LLANPLRVRF HYGHPDVFDR LFHLTRGGVS 1440 KASKVINLSE DIFAGFNSTL REGSVTHHEY IQVGKGRDVG LNQISMFEAK IANGNGEQTL 1500 SRDVYRLGHR FDFFRMLSCY FTTVGFYFST LITVLTVYIF LYGRLYLVLS GLEEGLSAQK 1560 AIRDNKPLQV ALASQSFVQI GFLMALPMLM EIGLERGFRT ALSEFILMQL QLAPVFFTFS 1620 LGTKTHYFGR TLLHGGAKYR PTGRGFVVFH AKFADNYRLY SRSHFVKGIE LLVLLVVYEI 1680 FSHSYRSAVA YILITVSMWF MVGTWLFAPF LFNPSGFEWQ KIVDDWTDWN KWISNRGGIG 1740 VPPEKSWESW WEEEQDHLQY SGIRGIIVEI LLSLRFFIYQ YGLVYHLNIT KKGSKSFLVY 1800 GISWLVIFVI LFVMKTVSVG RRKFSANFQL VFRLIKGMIF VTFIAILVIL IALPHMTPQD 1860 IIVCILAFMP TGWGMLQIAQ ALKPIVRRAG FWGSVKTLAR GYEIVMGLLL FTPVAFLAWF 1920 PFVSEFQTRM LFNQAFSRGL QISRILGGQR KERASRSKE* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam04652 | DUF605 | 6.0e-10 | 45 | 159 | 120 | + Vta1 like. Vta1 (VPS20-associated protein 1) is a positive regulator of Vps4. Vps4 is an ATPase that is required in the multivesicular body (MVB) sorting pathway to dissociate the endosomal sorting complex required for transport (ESCRT). Vta1 promotes correct assembly of Vps4 and stimulates its ATPase activity through its conserved Vta1/SBP1/LIP5 region. | ||
| pfam14288 | FKS1_dom1 | 4.0e-59 | 320 | 436 | 118 | + 1,3-beta-glucan synthase subunit FKS1, domain-1. The FKS1_dom1 domain is likely to be the 'Class I' region just N-terminal to the first set of transmembrane helices that is involved in 1,3-beta-glucan synthesis itself. This family is found on proteins with family Glucan_synthase, pfam02364. | ||
| pfam02364 | Glucan_synthase | 0 | 1059 | 1811 | 822 | + 1,3-beta-glucan synthase component. This family consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase EC:2.4.1.34 also known as callose synthase catalyzes the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall. The reaction catalyzed is:- UDP-glucose + {(1,3)-beta-D-glucosyl}(N) <=> UDP + {(1,3)-beta-D-glucosyl}(N+1). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000148 | 1,3-beta-D-glucan synthase complex |
| GO:0003843 | 1,3-beta-D-glucan synthase activity |
| GO:0006075 | (1->3)-beta-D-glucan biosynthetic process |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI16456.1 | 0 | 1 | 1959 | 1 | 1948 | unnamed protein product [Vitis vinifera] |
| Swiss-Prot | Q9LXT9 | 0 | 3 | 1959 | 2 | 1964 | CALS3_ARATH RecName: Full=Callose synthase 3; AltName: Full=1,3-beta-glucan synthase; AltName: Full=Protein GLUCAN SYNTHASE-LIKE 12 |
| RefSeq | XP_002283298.1 | 0 | 1 | 1959 | 1 | 1947 | PREDICTED: similar to Callose synthase 3 [Vitis vinifera] |
| RefSeq | XP_002299147.1 | 0 | 5 | 1959 | 6 | 1940 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002528124.1 | 0 | 1 | 1959 | 1 | 1955 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2lxm_A | 0.002 | 49 | 158 | 21 | 128 | B Chain B, Lip5-chmp5 |
| PDB | 2lxl_A | 0.003 | 49 | 158 | 21 | 128 | A Chain A, Lip5(mit)2 |
