Basic Information | |
---|---|
Species | Medicago truncatula |
Cazyme ID | Medtr7g011530.1 |
Family | CE8 |
Protein Properties | Length: 317 Molecular Weight: 35370.9 Isoelectric Point: 6.6824 |
Chromosome | Chromosome/Scaffold: 7 Start: 2598678 End: 2603255 |
Description | pectin methylesterase 31 |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CE8 | 6 | 296 | 0 |
YTVSQNGTGDFQTVQEAIDAVPLGNSRRTVIRVSPGIYKQPVYVPKTKNFITLAGLCREETVLTWNNTSAKIDHHQPARVIGTGTFGCGSTIVEGEDFIA ENITFENSAPEGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKHYLKDCYVEGSVDFIFGNSTALLENCHIHCKSAGFITAQSRKSSQEATGYVFLR CVITGNGGHSYAYLGRPWGPFGRVVFAYTFMDPCVRQVGWDNWGKVENERSACFYEYRCFGPGCCPSNRANWCRELVDEEAEQFIMHPFID |
Full Sequence |
---|
Protein Sequence Length: 317 Download |
MAACVYTVSQ NGTGDFQTVQ EAIDAVPLGN SRRTVIRVSP GIYKQPVYVP KTKNFITLAG 60 LCREETVLTW NNTSAKIDHH QPARVIGTGT FGCGSTIVEG EDFIAENITF ENSAPEGSGQ 120 AVAIRVTADR CAFYNCRFLG WQDTLYLHYG KHYLKDCYVE GSVDFIFGNS TALLENCHIH 180 CKSAGFITAQ SRKSSQEATG YVFLRCVITG NGGHSYAYLG RPWGPFGRVV FAYTFMDPCV 240 RQVGWDNWGK VENERSACFY EYRCFGPGCC PSNRANWCRE LVDEEAEQFI MHPFIDPEPD 300 RSWLAQRMGL RIPYSA* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01095 | Pectinesterase | 5.0e-84 | 7 | 296 | 308 | + Pectinesterase. | ||
PLN02665 | PLN02665 | 1.0e-93 | 7 | 304 | 306 | + pectinesterase family protein | ||
PLN02432 | PLN02432 | 1.0e-97 | 1 | 304 | 306 | + putative pectinesterase | ||
PLN02682 | PLN02682 | 7.0e-106 | 7 | 296 | 299 | + pectinesterase family protein | ||
PLN02773 | PLN02773 | 0 | 1 | 316 | 316 | + pectinesterase |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABN08265.1 | 0 | 1 | 316 | 1 | 316 | Pectinesterase [Medicago truncatula] |
RefSeq | NP_566842.1 | 0 | 8 | 316 | 9 | 317 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002283941.1 | 0 | 1 | 316 | 1 | 316 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002305315.1 | 0 | 1 | 316 | 1 | 316 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002530008.1 | 0 | 1 | 316 | 1 | 316 | Pectinesterase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 8 | 304 | 11 | 308 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 3.00018e-42 | 8 | 277 | 7 | 277 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 3e-26 | 3 | 295 | 6 | 334 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 3e-26 | 3 | 295 | 6 | 334 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 3e-26 | 3 | 295 | 6 | 334 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
DY292729 | 314 | 1 | 313 | 0 |
DY292725 | 309 | 1 | 309 | 0 |
GR994392 | 306 | 1 | 306 | 0 |
ES794113 | 290 | 1 | 290 | 0 |
ES794113 | 69 | 249 | 317 | 0.007 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|