| Basic Information | |
|---|---|
| Species | Medicago truncatula |
| Cazyme ID | Medtr7g012540.1 |
| Family | GH5 |
| Protein Properties | Length: 531 Molecular Weight: 59834.4 Isoelectric Point: 8.4597 |
| Chromosome | Chromosome/Scaffold: 7 Start: 3077118 End: 3079572 |
| Description | Cellulase (glycosyl hydrolase family 5) protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH5 | 33 | 347 | 0 |
| VVDESGKRVKLHCINWSSHMNAMVAEGLDTIPLKDCIAQLKGLGFNCVRYTWATHMFTRYSTNKVGEKLDKLNLTGPRLGIGNFNPSMENITVVEAFDFV IDEFGKQGMMVLADNHVSDPKWCCDNNDGNGFFGDQYFNPEEWLQGLSNVANRVKGKPQVVAIGLRNELRGPKQNENNWHKYMSQGATTVHKANPDVLVF VSGLNYDTDLSFLKTKPLNVNIGNKLVYEVHSYAWSSGERSDWDKQPLNKKCANVMNNLNDKAGFLMSGSNPKPLVMSEFGINMENKTDMNEKFLSCMLA YLVGVDLDWALWAAQ | |||
| Full Sequence |
|---|
| Protein Sequence Length: 531 Download |
| MEGKYLSLII LLTISIFASN SNSFPLSTNK RWVVDESGKR VKLHCINWSS HMNAMVAEGL 60 DTIPLKDCIA QLKGLGFNCV RYTWATHMFT RYSTNKVGEK LDKLNLTGPR LGIGNFNPSM 120 ENITVVEAFD FVIDEFGKQG MMVLADNHVS DPKWCCDNND GNGFFGDQYF NPEEWLQGLS 180 NVANRVKGKP QVVAIGLRNE LRGPKQNENN WHKYMSQGAT TVHKANPDVL VFVSGLNYDT 240 DLSFLKTKPL NVNIGNKLVY EVHSYAWSSG ERSDWDKQPL NKKCANVMNN LNDKAGFLMS 300 GSNPKPLVMS EFGINMENKT DMNEKFLSCM LAYLVGVDLD WALWAAQGAY YIRKNEIIVS 360 ETFGIWSYDF RTLRYIEFPQ RFQLMHKKLL EPSSNSSKSY IIYHPLSGQC VKVNKRNKLV 420 LGDCDGKSKW NQVGQQIKLV GNDACIEAIK DGSQVKLSND CRSKQSFWKT LSATNLHLGT 480 LDSQGQNLCL QRKSPTSPKI VTKKCICIDD NPACLEDPQS QWFQLVTTNV * 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG2730 | BglC | 2.0e-6 | 61 | 325 | 295 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
| pfam00150 | Cellulase | 5.0e-14 | 34 | 346 | 326 | + Cellulase (glycosyl hydrolase family 5). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABD32354.1 | 0 | 1 | 529 | 1 | 534 | Glycoside hydrolase, family 5; Ricin B-related lectin [Medicago truncatula] |
| EMBL | CBI34404.1 | 0 | 2 | 530 | 19 | 560 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002272386.1 | 0 | 1 | 530 | 1 | 531 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002272534.1 | 0 | 2 | 530 | 3 | 544 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002509877.1 | 0 | 6 | 530 | 8 | 546 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1vrx_B | 1e-19 | 28 | 345 | 8 | 320 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
| PDB | 1vrx_A | 1e-19 | 28 | 345 | 8 | 320 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
| PDB | 1ece_B | 1e-18 | 28 | 345 | 8 | 320 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
| PDB | 1ece_A | 1e-18 | 28 | 345 | 8 | 320 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
| PDB | 3qhm_C | 0.0001 | 37 | 293 | 55 | 321 | A Chain A, Crystal Analysis Of The Complex Structure, E342a-Cellotetraose, Of Endocellulase From Pyrococcus Horikoshii |
