| Basic Information | |
|---|---|
| Species | Medicago truncatula |
| Cazyme ID | Medtr7g012840.1 |
| Family | GH5 |
| Protein Properties | Length: 535 Molecular Weight: 60184.9 Isoelectric Point: 6.1878 |
| Chromosome | Chromosome/Scaffold: 7 Start: 3197440 End: 3199906 |
| Description | Cellulase (glycosyl hydrolase family 5) protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH5 | 33 | 351 | 1.26117e-44 |
| IVDETGKRVKLHCVNWSSHMNAMVAEGLETIPLKDIITQLKGLGFDCVRYTWATKMFTRYSNYKVGENLDKLNLTSSRLGIRFYNPSFENITVVEAFDNV IDEFGRQGMMVLADNHVSDPKWCCDNNDGNGFFGDQYFNPEEWLQGLSNVSNRVKGKSQVVAIGLRNELRGPSQNISSWQKYMSQGATTVHKENPNVLVF VSGFNYDIDLSFLKTNPLNTSIGDKLVYEVHSYAWSTGDRSDWDKQPLNKKCANVMNNLNDKAGFLMSGSNPNPLVMSEFGADLTAIDDKNQTFNQRFLS CMLAYLAGVDLDWALWTAQ | |||
| Full Sequence |
|---|
| Protein Sequence Length: 535 Download |
| MGGKPLSLIL LLAFSIFASN SNSLPLSTNN RWIVDETGKR VKLHCVNWSS HMNAMVAEGL 60 ETIPLKDIIT QLKGLGFDCV RYTWATKMFT RYSNYKVGEN LDKLNLTSSR LGIRFYNPSF 120 ENITVVEAFD NVIDEFGRQG MMVLADNHVS DPKWCCDNND GNGFFGDQYF NPEEWLQGLS 180 NVSNRVKGKS QVVAIGLRNE LRGPSQNISS WQKYMSQGAT TVHKENPNVL VFVSGFNYDI 240 DLSFLKTNPL NTSIGDKLVY EVHSYAWSTG DRSDWDKQPL NKKCANVMNN LNDKAGFLMS 300 GSNPNPLVMS EFGADLTAID DKNQTFNQRF LSCMLAYLAG VDLDWALWTA QGSYYIRDKE 360 SNASEPFGIW NIDFKSLRYP DFSQRFQLVQ KKLLDPSLNS SKSYIIYHPL SGQCVKVNTN 420 NELELGDCEW ASKWNQEGQQ IKLVGNGTYI EAVSDGSQVK VSNDCKSKQS FWKTLSATNL 480 HLGTLDEQGQ KLCLQRESPT SPKIVTKRCI CIDDNPACLE DPQSQWFQLV TTNV* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG2730 | BglC | 3.0e-5 | 62 | 315 | 286 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
| pfam00150 | Cellulase | 1.0e-9 | 34 | 350 | 332 | + Cellulase (glycosyl hydrolase family 5). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABD32354.1 | 0 | 10 | 533 | 6 | 534 | Glycoside hydrolase, family 5; Ricin B-related lectin [Medicago truncatula] |
| EMBL | CBI34404.1 | 0 | 4 | 534 | 21 | 560 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002272386.1 | 0 | 1 | 534 | 1 | 531 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002272534.1 | 0 | 4 | 534 | 5 | 544 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002509877.1 | 0 | 7 | 534 | 4 | 546 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1vrx_B | 0.000000000000003 | 28 | 349 | 8 | 320 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
| PDB | 1vrx_A | 0.000000000000003 | 28 | 349 | 8 | 320 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
| PDB | 1ece_B | 0.00000000000003 | 28 | 349 | 8 | 320 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
| PDB | 1ece_A | 0.00000000000003 | 28 | 349 | 8 | 320 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
