| Basic Information | |
|---|---|
| Species | Medicago truncatula |
| Cazyme ID | Medtr7g037650.1 |
| Family | GT5 |
| Protein Properties | Length: 533 Molecular Weight: 59064.6 Isoelectric Point: 6.0742 |
| Chromosome | Chromosome/Scaffold: 7 Start: 10793854 End: 10795501 |
| Description | starch synthase 4 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT5 | 86 | 230 | 1.4e-23 |
| MDKLSIAPYGFEKSTWDPSTDYFLPENFNAKNNNGKSVCKVALLQRLGLSEHSSTILVGCNFSEGKHNVQFIFMETSERPDLNQALESLHMEFEDVDDIK FVRSYDEALSHLLFAGSDIILCQSFHDPTDETPLKALRYGAVPIA | |||
| Full Sequence |
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| Protein Sequence Length: 533 Download |
| MPPKPPDVVH TSSLNLPFSF TTKGQIGDAL APMIARGMML GTNQHVILHM LDIEPTLEAL 60 KGVKMELIDV DVAAAGYVDK SANIEMDKLS IAPYGFEKST WDPSTDYFLP ENFNAKNNNG 120 KSVCKVALLQ RLGLSEHSST ILVGCNFSEG KHNVQFIFME TSERPDLNQA LESLHMEFED 180 VDDIKFVRSY DEALSHLLFA GSDIILCQSF HDPTDETPLK ALRYGAVPIA VGSDSNTNYF 240 SCLSKTDGSV NENKLLSYDV LLPSTVQIPS IRQHNLIVKV AQPPPPPKPP DLCCRGVAAM 300 SFCSSSFYHS FHIHGCAGIQ EKFHAYDRKN RVFQLNSIFE TLTLKQYGPY CFQNHKLKYV 360 FIVTGIDHKN MTFHAFGHQG IIVVISENIV GLMVCEQSVG IDGVDLKGVV VLFEEVFDQP 420 HPLEGIKKPV DPRLGDNYPI DHVFKMAQLG KVCTNSDPQQ PPNMSSATAA LESDTRVLVF 480 ETSRMKRLRV NTISAGPLGS HAAKAIGFID IMIDYSSFYM DQQYSREFNS PM* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK00654 | glgA | 1.0e-19 | 99 | 230 | 147 | + glycogen synthase; Provisional | ||
| PRK06300 | PRK06300 | 6.0e-20 | 464 | 516 | 53 | + enoyl-(acyl carrier protein) reductase; Provisional | ||
| TIGR02095 | glgA | 1.0e-21 | 99 | 230 | 148 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| PLN02939 | PLN02939 | 2.0e-22 | 95 | 230 | 153 | + transferase, transferring glycosyl groups | ||
| PLN02730 | PLN02730 | 5.0e-24 | 464 | 517 | 54 | + enoyl-[acyl-carrier-protein] reductase | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABN06103.1 | 0 | 176 | 532 | 1 | 357 | Protein kinase [Medicago truncatula] |
| GenBank | ABN06104.1 | 0 | 1 | 150 | 1 | 150 | hypothetical protein MtrDRAFT_AC150800g12v2 [Medicago truncatula] |
| GenBank | ACD13787.1 | 0 | 17 | 238 | 387 | 614 | starch synthase V precursor [Lotus japonicus] |
| GenBank | ACD13789.1 | 0 | 78 | 233 | 435 | 605 | starch synthase V precursor [Vitis vinifera] |
| RefSeq | XP_002262708.1 | 0 | 78 | 233 | 83 | 253 | PREDICTED: starch synthase V, partial [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1cwu_B | 4e-18 | 458 | 516 | 185 | 243 | A Chain A, Brassica Napus Enoyl Acp Reductase A138g Mutant Complexed With Nad+ And Thienodiazaborine |
| PDB | 1cwu_A | 4e-18 | 458 | 516 | 185 | 243 | A Chain A, Brassica Napus Enoyl Acp Reductase A138g Mutant Complexed With Nad+ And Thienodiazaborine |
| PDB | 1d7o_A | 5e-18 | 458 | 516 | 186 | 244 | A Chain A, Crystal Structure Of Brassica Napus Enoyl Acyl Carrier Protein Reductase Complexed With Nad And Triclosan |
| PDB | 1enp_A | 6e-18 | 458 | 516 | 196 | 254 | A Chain A, Crystal Structure Of Brassica Napus Enoyl Acyl Carrier Protein Reductase Complexed With Nad And Triclosan |
| PDB | 1eno_A | 6e-18 | 458 | 516 | 196 | 254 | A Chain A, Brassica Napus Enoyl Acp ReductaseNAD BINARY COMPLEX AT PH 8.0 AND Room Temperature |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HS108086 | 177 | 78 | 238 | 0 |
| FG911714 | 177 | 78 | 238 | 0 |
| BM887346 | 147 | 108 | 238 | 0 |
| DV455772 | 175 | 78 | 236 | 0 |
| FE692411 | 147 | 108 | 238 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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