Basic Information | |
---|---|
Species | Medicago truncatula |
Cazyme ID | Medtr7g081350.1 |
Family | GH17 |
Protein Properties | Length: 339 Molecular Weight: 36787 Isoelectric Point: 5.6958 |
Chromosome | Chromosome/Scaffold: 7 Start: 23471086 End: 23472542 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH17 | 27 | 335 | 0 |
IGVNFGRNGDNLPSPQNVVGLYNKCGIKLLRLFEPSPDILEALKGSNIQVSLGVRNQDLQSLASTKEAASQWVNTNVAPYKGGVNFQWIVLGNEIIPGAQ ASFVTQAMQKIKDALTSIGLTDIKVTTSFYMQGLASSYPPSAGAFTNDVVNVMKDVTAYLHQTGAPLMVNVYPYFAYASNPKDIKLEYATFQAVAPVVDG ELSYTNLFDAMVDSIYAALEKIDAKNVSLIIGETGWPAAGNDPYTSKENAKTYNTNLIQHLQSGKGTPRRPNQAIDAFIFAMFDEDQKAAGVEQNWGLFY HDLTPVYPL |
Full Sequence |
---|
Protein Sequence Length: 339 Download |
MSSLRIKSIF LTLALILAIQ LHLSTGIGVN FGRNGDNLPS PQNVVGLYNK CGIKLLRLFE 60 PSPDILEALK GSNIQVSLGV RNQDLQSLAS TKEAASQWVN TNVAPYKGGV NFQWIVLGNE 120 IIPGAQASFV TQAMQKIKDA LTSIGLTDIK VTTSFYMQGL ASSYPPSAGA FTNDVVNVMK 180 DVTAYLHQTG APLMVNVYPY FAYASNPKDI KLEYATFQAV APVVDGELSY TNLFDAMVDS 240 IYAALEKIDA KNVSLIIGET GWPAAGNDPY TSKENAKTYN TNLIQHLQSG KGTPRRPNQA 300 IDAFIFAMFD EDQKAAGVEQ NWGLFYHDLT PVYPLLSC* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 3.0e-10 | 64 | 328 | 273 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 3.0e-119 | 27 | 335 | 311 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABN05912.1 | 0 | 1 | 338 | 1 | 319 | Glycoside hydrolase, family 17 [Medicago truncatula] |
GenBank | ABN05913.1 | 0 | 1 | 338 | 1 | 338 | Glycoside hydrolase, family 17 [Medicago truncatula] |
GenBank | ACF06549.1 | 0 | 5 | 335 | 4 | 336 | beta-1,3-glucanase [Elaeis guineensis] |
RefSeq | XP_002302261.1 | 0 | 23 | 338 | 3 | 319 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002306606.1 | 0 | 28 | 335 | 1 | 308 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 27 | 333 | 1 | 308 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 27 | 326 | 2 | 304 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 27 | 326 | 2 | 304 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 27 | 326 | 2 | 304 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 27 | 326 | 2 | 304 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |