Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr7g086030.1 |
Family | GH3 |
Protein Properties | Length: 633 Molecular Weight: 69936.5 Isoelectric Point: 5.1942 |
Chromosome | Chromosome/Scaffold: 7 Start: 26007314 End: 26011940 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 106 | 341 | 0 |
LSTRLGIPIFYGIDAVHGNSPVYKATIFPHNIGLGATRDPELVKRIGAATALEVRATGMQYVYAPCIAVCRDPRWGRCYESYSEDPKVVQAMTEIIPGMQ GDVPDNMPMGVPFIAGNEKVIACAKHYVGDGGTTNGIDESDTVIDRDGLMEIHMPGYLSSISKGVATIMVSYSSWNGDKMHAHHDLITGFLKNTLHFQGF VISDFEGIDRITSPFRANCTYSVQAGVSAGIDMFMV |
Full Sequence |
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Protein Sequence Length: 633 Download |
MAKIPIFLVG FWLLSNWAGL LETEDMMKYK NPNESIDIRV EDLISRMTLE EKIGQMLQIE 60 RKYASDNVLN KYFIGSVMSE GGSTPVPQAS AENWIDMLNE FQKDALSTRL GIPIFYGIDA 120 VHGNSPVYKA TIFPHNIGLG ATRDPELVKR IGAATALEVR ATGMQYVYAP CIAVCRDPRW 180 GRCYESYSED PKVVQAMTEI IPGMQGDVPD NMPMGVPFIA GNEKVIACAK HYVGDGGTTN 240 GIDESDTVID RDGLMEIHMP GYLSSISKGV ATIMVSYSSW NGDKMHAHHD LITGFLKNTL 300 HFQGFVISDF EGIDRITSPF RANCTYSVQA GVSAGIDMFM VPKFYTEFID DLTTLVNNKF 360 IPMSRIDDAV RRILRVKFMM GIFENPFADY SLVKYLGIKE HKELAREAVR KSMVLLKNGK 420 SAEKPLLPLP KKVPKILVAG SHANNLGYQC GGWTIEWQGV NGNDDIKGTT ILNAVKNTVD 480 PETTVIYKEN PDKEFLESNE FCYAIVVVGE HPYAEMHGDN MNLTIPNPGP EIITNVCGAM 540 KCVVIIISGR PLVIEPYVGL IDAVVAGWLP GSEGQGVADV LFGDYGFTGK LPRTWFKSVD 600 QLPMNVGDPH YDPVFPFGFG LTTKPTKPIY SE* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 2.0e-34 | 31 | 631 | 671 | + Probable beta-xylosidase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 5.0e-41 | 413 | 622 | 229 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 1.0e-68 | 40 | 622 | 658 | + beta-D-glucoside glucohydrolase; Provisional | ||
COG1472 | BglX | 3.0e-76 | 47 | 418 | 379 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 4.0e-90 | 48 | 376 | 333 | + Glycosyl hydrolase family 3 N terminal domain. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABD28427.1 | 0 | 1 | 632 | 1 | 632 | Glycoside hydrolase, family 3, N-terminal; Glycoside hydrolase, family 3, C-terminal [Medicago truncatula] |
GenBank | ABK95015.1 | 0 | 1 | 629 | 1 | 626 | unknown [Populus trichocarpa] |
EMBL | CBI39076.1 | 0 | 27 | 627 | 26 | 634 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002266470.1 | 0 | 27 | 627 | 26 | 626 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002319151.1 | 0 | 27 | 629 | 1 | 603 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1j8v_A | 0 | 25 | 627 | 1 | 603 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 1iex_A | 0 | 25 | 627 | 1 | 603 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 1iew_A | 0 | 25 | 627 | 1 | 603 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 1iev_A | 0 | 25 | 627 | 1 | 603 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 1ieq_A | 0 | 25 | 627 | 1 | 603 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |