Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr7g087120.1 |
Family | GT47 |
Protein Properties | Length: 408 Molecular Weight: 45415.5 Isoelectric Point: 8.3301 |
Chromosome | Chromosome/Scaffold: 7 Start: 26567406 End: 26572354 |
Description | exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 10 | 116 | 5.59959e-42 |
GYARQELFYLLKEEKDVHFSFGSVQKGGVRNATNGMRSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPYEDVLDYSKFCVFVRTRDAVKKKYL INFIRSI |
Full Sequence |
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Protein Sequence Length: 408 Download |
MYNVFCVLGG YARQELFYLL KEEKDVHFSF GSVQKGGVRN ATNGMRSSKF CLNIAGDTPS 60 SNRLFDAIAS HCVPVIISDE IELPYEDVLD YSKFCVFVRT RDAVKKKYLI NFIRSIGKDE 120 WTRMWNRLKE VEKFFEFQFP SKEGDAVEMI WQAVSRKVPF MKLKTNRSRR FFRALYGNNK 180 YKGHKSIHIH FETTGPEIWE DTMGNVDLLV AAIGTGGTIT GTGQYLKLMN KKIKELGYML 240 LYSCVATLAW EDSLDILYMV SEPIRSIVGL ASSTLQAHGP EVVGVEPADR SIISGDNPGF 300 IPSILDIKLL DEVVKLILCS RPGLGGVQGA QPGRVTNVEA IEMARRLALE EGLLVGISSG 360 AAAAAAITLA RRPENSGKLI TVIFPSFGER YLTTALFSSI YEEVQRM* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN00011 | PLN00011 | 5.0e-37 | 180 | 407 | 238 | + cysteine synthase | ||
PLN02556 | PLN02556 | 1.0e-38 | 186 | 407 | 232 | + cysteine synthase/L-3-cyanoalanine synthase | ||
TIGR01139 | cysK | 9.0e-39 | 189 | 397 | 219 | + cysteine synthase A. This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate [Amino acid biosynthesis, Serine family]. | ||
TIGR01136 | cysKM | 3.0e-41 | 189 | 397 | 219 | + cysteine synthase. This model discriminates cysteine synthases (EC 2.5.1.47) (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblamnce to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded from the seed and score below the trusted cutoff [Amino acid biosynthesis, Serine family]. | ||
PLN02565 | PLN02565 | 1.0e-41 | 189 | 407 | 229 | + cysteine synthase |
Gene Ontology | |
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GO Term | Description |
GO:0003824 | catalytic activity |
GO:0008152 | metabolic process |
GO:0016020 | membrane |
GO:0030170 | pyridoxal phosphate binding |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAX33321.1 | 0 | 9 | 173 | 326 | 490 | secondary cell wall-related glycosyltransferase family 47 [Populus tremula x Populus tremuloides] |
EMBL | CBI31205.1 | 0 | 9 | 180 | 272 | 443 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002319201.1 | 0 | 9 | 171 | 287 | 449 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002325457.1 | 0 | 9 | 180 | 280 | 449 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002530948.1 | 0 | 9 | 179 | 317 | 486 | catalytic, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 4aec_B | 2e-36 | 176 | 407 | 251 | 426 | A Chain A, Crystal Structure Of The Arabidopsis Thaliana O-Acetyl- Serine-(Thiol)-Lyase C |
PDB | 4aec_A | 2e-36 | 176 | 407 | 251 | 426 | A Chain A, Crystal Structure Of The Arabidopsis Thaliana O-Acetyl- Serine-(Thiol)-Lyase C |
PDB | 2isq_A | 2e-33 | 176 | 407 | 141 | 316 | B Chain B, Crystal Structure Of O-Acetylserine Sulfhydrylase From Arabidopsis Thaliana In Complex With C-Terminal Peptide From Arabidopsis Serine Acetyltransferase |
PDB | 1z7w_A | 2e-33 | 176 | 407 | 143 | 318 | A Chain A, Crystal Structure Of O-Acetylserine Sulfhydrylase From Arabidopsis Thaliana |
PDB | 1z7y_A | 2e-33 | 176 | 407 | 143 | 318 | A Chain A, Crystal Structure Of The Arabidopsis Thaliana O-Acetylserine Sulfhydrylase K46a Mutant |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DN492405 | 165 | 9 | 173 | 0 |
JG591849 | 170 | 9 | 178 | 0 |
DT736498 | 172 | 9 | 180 | 0 |
JG076225 | 171 | 9 | 178 | 0 |
FQ365203 | 166 | 9 | 174 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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