| Basic Information | |
|---|---|
| Species | Medicago truncatula |
| Cazyme ID | Medtr7g087890.1 |
| Family | GH51 |
| Protein Properties | Length: 764 Molecular Weight: 83096.2 Isoelectric Point: 5.472 |
| Chromosome | Chromosome/Scaffold: 7 Start: 26974672 End: 26979460 |
| Description | alpha-L-arabinofuranosidase 2 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH51 | 183 | 650 | 0 |
| NISAFGVNVTKWSRMETILEANGTNHNSSLQITTSNRGVVWLDQVSAMPLDTYKGHGFRSDLYQMAADLKPKTFRFPGGCYVEGDYLRNAFRWKDTVGPW EERPGHFNDIWNYWTDDGFGYFEGLQLSEDLGAFPVWVFNSGISHHDEVNTSDISPFVQEALDGIEFARGSSTSQWGSLRASMGHPEPFDLRFVAIGNED CHKYNYLGNYLKFYEAIKHDYPDIQIISNCDGSIHQLDHPADLYDFXDMFSDYTKFDNAPRSGPKAFVSEYAVWKEDAGAGSLYAAVAEAAFLIGLEKNS DIVSMVAYAPLFLNTNDRKWIPDAIVFNSYQNYGTPSYWLQQLFIESSGATLLNSTLQNSSSSIVASAIEYKNSQDGKNYLRVKVVNFGNATENFMISIN GLNSIVQSSNSSMVVLTSSNRMDENSFSEPNKDAQTEQATTQAAGLNADAQGPTHAAGLNATAQAPTN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 764 Download |
| MSFSHMFTAF LFSLIVCLVI SECHADVNAN ASHISKLVID ARTRRPIPDT FFGAFFEEIN 60 HAGAGGLWAE LVDNRGFEAG GSNVSSNINP WIIIGDNSSS IIVSTDRSSC FECNKVALRS 120 DVLCQGQSCP LGGVGISNPG FWGMNIEQGK KYKVVFYVRS LGPINLQVSF IGSDDGVKLA 180 STNISAFGVN VTKWSRMETI LEANGTNHNS SLQITTSNRG VVWLDQVSAM PLDTYKGHGF 240 RSDLYQMAAD LKPKTFRFPG GCYVEGDYLR NAFRWKDTVG PWEERPGHFN DIWNYWTDDG 300 FGYFEGLQLS EDLGAFPVWV FNSGISHHDE VNTSDISPFV QEALDGIEFA RGSSTSQWGS 360 LRASMGHPEP FDLRFVAIGN EDCHKYNYLG NYLKFYEAIK HDYPDIQIIS NCDGSIHQLD 420 HPADLYDFXD MFSDYTKFDN APRSGPKAFV SEYAVWKEDA GAGSLYAAVA EAAFLIGLEK 480 NSDIVSMVAY APLFLNTNDR KWIPDAIVFN SYQNYGTPSY WLQQLFIESS GATLLNSTLQ 540 NSSSSIVASA IEYKNSQDGK NYLRVKVVNF GNATENFMIS INGLNSIVQS SNSSMVVLTS 600 SNRMDENSFS EPNKDAQTEQ ATTQAAGLNA DAQGPTHAAG LNATAQAPTN GANAVEQATT 660 ISARTNAIAQ AGTNLHSNVT NIAAEQGSKQ SKKQTAAAIN KTAVVNIAAV NTTTTNTSGT 720 TLGGRHVVGE VSLFVPRKSR TTGVKRSIRE VGNVGTQQSV NKT* |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| pfam06964 | Alpha-L-AF_C | 2.0e-21 | 451 | 614 | 181 | + Alpha-L-arabinofuranosidase C-terminus. This family represents the C-terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase (EC:3.2.1.55). This catalyzes the hydrolysis of nonreducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. |
| COG3534 | AbfA | 3.0e-28 | 239 | 516 | 354 | + Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] |
| smart00813 | Alpha-L-AF_C | 1.0e-28 | 451 | 614 | 174 | + Alpha-L-arabinofuranosidase C-terminus. This entry represents the C terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase. This catalyses the hydrolysis of non-reducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0046373 | L-arabinose metabolic process |
| GO:0046556 | alpha-N-arabinofuranosidase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAP97437.1 | 0 | 20 | 614 | 20 | 625 | alpha-L-arabinofuranosidase [Malus x domestica] |
| GenBank | ABF22680.3 | 0 | 17 | 614 | 18 | 625 | alpha-L-arabinofuranosidase [Prunus persica] |
| DDBJ | BAF42035.1 | 0 | 10 | 627 | 11 | 637 | alpha-Arabinosidase1 [Pyrus communis] |
| RefSeq | XP_002307940.1 | 0 | 14 | 614 | 11 | 621 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002523672.1 | 0 | 23 | 638 | 29 | 652 | Alpha-N-arabinofuranosidase 1 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3s2c_L | 4e-17 | 238 | 613 | 47 | 452 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_K | 4e-17 | 238 | 613 | 47 | 452 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_J | 4e-17 | 238 | 613 | 47 | 452 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_I | 4e-17 | 238 | 613 | 47 | 452 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_H | 4e-17 | 238 | 613 | 47 | 452 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
