| Basic Information | |
|---|---|
| Species | Medicago truncatula |
| Cazyme ID | Medtr7g087960.1 |
| Family | GH51 |
| Protein Properties | Length: 611 Molecular Weight: 67796.5 Isoelectric Point: 4.6785 |
| Chromosome | Chromosome/Scaffold: 7 Start: 27010651 End: 27018419 |
| Description | alpha-L-arabinofuranosidase 1 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH51 | 142 | 497 | 0 |
| NISAFGVNVTKWSRMETILEANGTNHNSSLQITTSNRGVVWLDQVSAMPLDTYKGHGFRSDLYQMAADLKPKTFRFPGGCYVEGDYLRNAFRWKDTVGPW EERPGHFNDIWNYWTDDGFGYFEGLQLSEDLGAFPVWVFNSGISHHDEVNTSDISPFVQEALDGIEFARGSSTSQWGSLRASMGHPEPFDLRFVAIGNED CHKYNYLGNYLKFYEAIKHDSPDIQIISNCDGSIHQLDHPADLYDFHIYTDSKDIFSDHTKFDNAPRSGPKAFVSEYAVWKEDAGAGSLYAAVAEAAFLI GLEKNSDIVSKVAYAPLFLNTNDRKWIPDTIVFNSYQNYGTPSYWLQQLFIESSGA | |||
| Full Sequence |
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| Protein Sequence Length: 611 Download |
| MLIRPIPDTF FGAFFEEINH AGAGGLWAEL VDNRGFEAGG SNVSSNINLW TIIEDNSSSI 60 IVSTDRSSCF ERNKVALRLD VLCQGQSCPL GGVGISNPEF WGMNIEQGKK YKVVFYVRSL 120 GPINLQVSFI GSDDGVKLAS TNISAFGVNV TKWSRMETIL EANGTNHNSS LQITTSNRGV 180 VWLDQVSAMP LDTYKGHGFR SDLYQMAADL KPKTFRFPGG CYVEGDYLRN AFRWKDTVGP 240 WEERPGHFND IWNYWTDDGF GYFEGLQLSE DLGAFPVWVF NSGISHHDEV NTSDISPFVQ 300 EALDGIEFAR GSSTSQWGSL RASMGHPEPF DLRFVAIGNE DCHKYNYLGN YLKFYEAIKH 360 DSPDIQIISN CDGSIHQLDH PADLYDFHIY TDSKDIFSDH TKFDNAPRSG PKAFVSEYAV 420 WKEDAGAGSL YAAVAEAAFL IGLEKNSDIV SKVAYAPLFL NTNDRKWIPD TIVFNSYQNY 480 GTPSYWLQQL FIESSGATLL NSTLQNSSSS IVASAIEYKN SQDGKNYLRV KVVNFGNATE 540 NFMILINGLN STVQSSNSSM VVLTSSNRMD ENSFSELNKI VPQRTALGNA SNDMDVRLPP 600 YSVTSFDLSI * |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam06964 | Alpha-L-AF_C | 2.0e-22 | 416 | 602 | 205 | + Alpha-L-arabinofuranosidase C-terminus. This family represents the C-terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase (EC:3.2.1.55). This catalyzes the hydrolysis of nonreducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| COG3534 | AbfA | 2.0e-28 | 198 | 603 | 478 | + Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] | ||
| smart00813 | Alpha-L-AF_C | 2.0e-31 | 416 | 602 | 198 | + Alpha-L-arabinofuranosidase C-terminus. This entry represents the C terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase. This catalyses the hydrolysis of non-reducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0046373 | L-arabinose metabolic process |
| GO:0046556 | alpha-N-arabinofuranosidase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAP97437.1 | 0 | 4 | 608 | 46 | 654 | alpha-L-arabinofuranosidase [Malus x domestica] |
| GenBank | ABV32544.1 | 0 | 4 | 610 | 46 | 659 | alpha-L-arabinofuranosidase protein [Prunus persica] |
| DDBJ | BAF42035.1 | 0 | 4 | 608 | 46 | 654 | alpha-Arabinosidase1 [Pyrus communis] |
| RefSeq | XP_002307940.1 | 0 | 4 | 608 | 46 | 650 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002523672.1 | 0 | 4 | 608 | 50 | 658 | Alpha-N-arabinofuranosidase 1 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3s2c_L | 5e-20 | 197 | 511 | 47 | 373 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_K | 5e-20 | 197 | 511 | 47 | 373 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_J | 5e-20 | 197 | 511 | 47 | 373 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_I | 5e-20 | 197 | 511 | 47 | 373 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_H | 5e-20 | 197 | 511 | 47 | 373 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO852683 | 415 | 198 | 610 | 0 |
| GT046204 | 349 | 183 | 531 | 0 |
| HO807291 | 316 | 105 | 420 | 0 |
| HO780740 | 385 | 226 | 608 | 0 |
| JG577027 | 319 | 69 | 387 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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