| Basic Information | |
|---|---|
| Species | Medicago truncatula |
| Cazyme ID | Medtr7g088420.1 |
| Family | GH51 |
| Protein Properties | Length: 673 Molecular Weight: 73478.2 Isoelectric Point: 6.6724 |
| Chromosome | Chromosome/Scaffold: 7 Start: 27237716 End: 27244137 |
| Description | alpha-L-arabinofuranosidase 1 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH51 | 195 | 534 | 0 |
| TIITASASSSNASLTLRTTKKGTIWLDQVSAMPQDTYKGHGFRSDLVEMIMQLKPAFFRFPGGNFLRGGALMNAFRWKDTVGPQEQRPGHFNDVWNYWTD EGFGYYEGLQLAEDIGATPVWVINNGLSETDSVDTSAISPFVQEALDSIEFARGPSTSKWGAIRASMGHPEPFVLKYIALGSNNCGMKNYLGNYLAFHKA IRQSYPDIQIISNCDAHEKPLDHPADLYEYKNYPKDDARAMFNLGVNFDKSPRNGPKAFVSEYALIGDKQAKFGTILAGVAEAGFLIGLERNSDHVAMAS YAPLLVNANDRNWSPDAIVFDSDQSYGTPSYWTQVLFKES | |||
| Full Sequence |
|---|
| Protein Sequence Length: 673 Download |
| MVFSKSCCSF FRLCLIIVSF VAFQCNADGN QTSTLVVNAG SAGRPIPNTL FGISLEEVNR 60 AGTGGIWSEL VSNRGFEAGG TQVPSNFDPW AIVGTEADIH VVTELSSSFE RNKVALRIDV 120 LCDNCPVDGV GISNPGFKGM NIVQGKQYKV ALNYRSSGPQ DMTISFRDAK SGGILGSSQI 180 IKRNKKVAKW KKMETIITAS ASSSNASLTL RTTKKGTIWL DQVSAMPQDT YKGHGFRSDL 240 VEMIMQLKPA FFRFPGGNFL RGGALMNAFR WKDTVGPQEQ RPGHFNDVWN YWTDEGFGYY 300 EGLQLAEDIG ATPVWVINNG LSETDSVDTS AISPFVQEAL DSIEFARGPS TSKWGAIRAS 360 MGHPEPFVLK YIALGSNNCG MKNYLGNYLA FHKAIRQSYP DIQIISNCDA HEKPLDHPAD 420 LYEYKNYPKD DARAMFNLGV NFDKSPRNGP KAFVSEYALI GDKQAKFGTI LAGVAEAGFL 480 IGLERNSDHV AMASYAPLLV NANDRNWSPD AIVFDSDQSY GTPSYWTQVL FKESNGATFI 540 NSQLQTPDPG MLAASAILCK NPQNNDTHLK IKISYLSIVT NSILSHDGET QLILQIANLG 600 NNQVNLKISL QGYVSKNLAG STKTVLASQN ILDENSFTEP KKIAPQQSPL QNPGNEMNVI 660 IPPISLTVLD IF* 720 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3534 | AbfA | 5.0e-34 | 235 | 671 | 501 | + Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] | ||
| pfam06964 | Alpha-L-AF_C | 3.0e-35 | 468 | 665 | 201 | + Alpha-L-arabinofuranosidase C-terminus. This family represents the C-terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase (EC:3.2.1.55). This catalyzes the hydrolysis of nonreducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| smart00813 | Alpha-L-AF_C | 8.0e-42 | 455 | 665 | 218 | + Alpha-L-arabinofuranosidase C-terminus. This entry represents the C terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase. This catalyses the hydrolysis of non-reducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0046373 | L-arabinose metabolic process |
| GO:0046556 | alpha-N-arabinofuranosidase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAP97437.1 | 0 | 8 | 672 | 18 | 655 | alpha-L-arabinofuranosidase [Malus x domestica] |
| GenBank | ABV32544.1 | 0 | 14 | 672 | 18 | 658 | alpha-L-arabinofuranosidase protein [Prunus persica] |
| DDBJ | BAF42035.1 | 0 | 15 | 672 | 16 | 655 | alpha-Arabinosidase1 [Pyrus communis] |
| RefSeq | XP_002307940.1 | 0 | 1 | 672 | 1 | 651 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002523672.1 | 0 | 25 | 672 | 29 | 659 | Alpha-N-arabinofuranosidase 1 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3ug5_F | 7e-18 | 235 | 546 | 68 | 388 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
| PDB | 3ug5_E | 7e-18 | 235 | 546 | 68 | 388 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
| PDB | 3ug5_D | 7e-18 | 235 | 546 | 68 | 388 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
| PDB | 3ug5_C | 7e-18 | 235 | 546 | 68 | 388 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
| PDB | 3ug5_B | 7e-18 | 235 | 546 | 68 | 388 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
