| Basic Information | |
|---|---|
| Species | Medicago truncatula |
| Cazyme ID | Medtr7g088470.1 |
| Family | GH51 |
| Protein Properties | Length: 718 Molecular Weight: 79128.3 Isoelectric Point: 8.4286 |
| Chromosome | Chromosome/Scaffold: 7 Start: 27265262 End: 27270792 |
| Description | alpha-L-arabinofuranosidase 1 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH51 | 217 | 647 | 0 |
| EGTVWLDQVSAMPTDTFKGHGFRKDLVEMLIQLKPAFLRFPGGCFVEGVQLRNAFRWKDSVGPWEQRPGHLNDIWNYWTDDGLGFFEGLQLAEDIGALPI WVFNNGISHSDEVDTSVISPFVKEALEGIEFARGSSTSKWGSVRASMGHPKPFNLKYVAIGNEDCYKKNYYGNYMAFYKAIKKFYPDIQIISNCPAFKTP LNHPADLYDYHTYPIDARAMFNAYHDFDKSPRNGPKAFVSEYALIGALQAKYGTLLGAVSEAGFLIGLERNSDHVAMASYAPLLVNANDRNWNPDAIVFN SYQAYGTPSYWVTYMFKESNGATFLNSQLQTPDPGSLIASAILCQSPQNNSTYLKIKIANIGSIPVNLKISLQGYVSKNLAGSTKTVLTSGNILDENTFA APKKIAPQTSPLQNPGNEMNVMIPPVSLTFN | |||
| Full Sequence |
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| Protein Sequence Length: 718 Download |
| MTFSKACCSF LWLYLIIVSF VAFQCNANGS QISSLVVNAA QGRPMPNTLF GIFYEEINHA 60 GSGGIWAQLV NNSGFEAAGT RTPSNIFPWT IIGTESSVKL QTELSSCFER NKVALRMDVL 120 CDKCPPDGVG VSNPGFWGMN IVQGKKYKVV FFYRSLGSLD MRVAFRDAIS GRILASSHII 180 RHKASKKKGS KWQRVQTILE ARASSSNSNL TLTTTKEGTV WLDQVSAMPT DTFKGHGFRK 240 DLVEMLIQLK PAFLRFPGGC FVEGVQLRNA FRWKDSVGPW EQRPGHLNDI WNYWTDDGLG 300 FFEGLQLAED IGALPIWVFN NGISHSDEVD TSVISPFVKE ALEGIEFARG SSTSKWGSVR 360 ASMGHPKPFN LKYVAIGNED CYKKNYYGNY MAFYKAIKKF YPDIQIISNC PAFKTPLNHP 420 ADLYDYHTYP IDARAMFNAY HDFDKSPRNG PKAFVSEYAL IGALQAKYGT LLGAVSEAGF 480 LIGLERNSDH VAMASYAPLL VNANDRNWNP DAIVFNSYQA YGTPSYWVTY MFKESNGATF 540 LNSQLQTPDP GSLIASAILC QSPQNNSTYL KIKIANIGSI PVNLKISLQG YVSKNLAGST 600 KTVLTSGNIL DENTFAAPKK IAPQTSPLQN PGNEMNVMIP PVSLTFNSFL IARDLERYIS 660 GDKLCSSPSI PDGGSLVMNP SYSFWIRQDK PLYIALLGLC DVKASVVMAT TDTSCDA* 720 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3534 | AbfA | 5.0e-38 | 237 | 643 | 476 | + Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] | ||
| pfam06964 | Alpha-L-AF_C | 2.0e-40 | 463 | 643 | 190 | + Alpha-L-arabinofuranosidase C-terminus. This family represents the C-terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase (EC:3.2.1.55). This catalyzes the hydrolysis of nonreducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| smart00813 | Alpha-L-AF_C | 2.0e-46 | 466 | 643 | 183 | + Alpha-L-arabinofuranosidase C-terminus. This entry represents the C terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase. This catalyses the hydrolysis of non-reducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0046373 | L-arabinose metabolic process |
| GO:0046556 | alpha-N-arabinofuranosidase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABV08815.1 | 0 | 25 | 651 | 16 | 646 | alpha-L-arabinofuranosidase [Fragaria x ananassa] |
| GenBank | ABV08816.1 | 0 | 25 | 651 | 18 | 648 | alpha-L-arabinofuranosidase [Fragaria x ananassa] |
| GenBank | ABV32544.1 | 0 | 20 | 667 | 21 | 675 | alpha-L-arabinofuranosidase protein [Prunus persica] |
| RefSeq | XP_002307940.1 | 0 | 1 | 645 | 1 | 646 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002523672.1 | 0 | 19 | 667 | 30 | 676 | Alpha-N-arabinofuranosidase 1 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4atw_F | 1e-16 | 237 | 379 | 48 | 172 | A Chain A, The Crystal Structure Of Arabinofuranosidase |
| PDB | 4atw_E | 1e-16 | 237 | 379 | 48 | 172 | A Chain A, The Crystal Structure Of Arabinofuranosidase |
| PDB | 4atw_D | 1e-16 | 237 | 379 | 48 | 172 | A Chain A, The Crystal Structure Of Arabinofuranosidase |
| PDB | 4atw_C | 1e-16 | 237 | 379 | 48 | 172 | A Chain A, The Crystal Structure Of Arabinofuranosidase |
| PDB | 4atw_B | 1e-16 | 237 | 379 | 48 | 172 | A Chain A, The Crystal Structure Of Arabinofuranosidase |
