Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr7g098650.1 |
Family | GT47 |
Protein Properties | Length: 540 Molecular Weight: 62292.9 Isoelectric Point: 7.764 |
Chromosome | Chromosome/Scaffold: 7 Start: 30671421 End: 30673731 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 80 | 420 | 0 |
GGRYIYVHNLPSRFNQDMLRECKTLSLWTNMCKFTTNAGLGPPLENIDGVFSDTGWYATNQFAVDVIFANRMKQYECLTNDSSIAAAVFVPFYAGFDIAR YLWGYNISMRDAASVELVDWLMKRPEWGVMNGRDHFLVAGRITWDFRRLSEDEKDWGNKLLFLPAAKNMSMLVVESSPWNANDFGIPYPTYFHPAKDKDV FVWQERMRRLERKWLFSFAGAPRPGNAKSIRGQIIEQCRSSKVGKLLECDFGESKCHSPSSIMQMFQGSVFCLQPQGDSYTRRSAFDSMLAGCILVFFHP GSAYTQYTWHLPKDYTKYSVFIPEDDIRKRNVSIEERLSQI |
Full Sequence |
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Protein Sequence Length: 540 Download |
MRRRPVAAIF SDQMEKSTTK SHNSRIFFLA SLSAFFWLLL LYFHFIILPH QQSSTTVNIQ 60 QPPPRKHFGF PDIKKTDPCG GRYIYVHNLP SRFNQDMLRE CKTLSLWTNM CKFTTNAGLG 120 PPLENIDGVF SDTGWYATNQ FAVDVIFANR MKQYECLTND SSIAAAVFVP FYAGFDIARY 180 LWGYNISMRD AASVELVDWL MKRPEWGVMN GRDHFLVAGR ITWDFRRLSE DEKDWGNKLL 240 FLPAAKNMSM LVVESSPWNA NDFGIPYPTY FHPAKDKDVF VWQERMRRLE RKWLFSFAGA 300 PRPGNAKSIR GQIIEQCRSS KVGKLLECDF GESKCHSPSS IMQMFQGSVF CLQPQGDSYT 360 RRSAFDSMLA GCILVFFHPG SAYTQYTWHL PKDYTKYSVF IPEDDIRKRN VSIEERLSQI 420 PEERVRIMRE EVISLIPRLV YADPRSKLET LKDAFDVSVQ AVIDKVTNLR KDIIEGRTDE 480 NFIEENSWKY ALLDEGQHEV GPHEWDPFFS KPKDGNGESS DSSAEVAKNS WKNEQRTQS* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 2.0e-69 | 78 | 420 | 359 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAD21751.1 | 0 | 75 | 539 | 128 | 599 | unknown protein [Arabidopsis thaliana] |
GenBank | ACY08857.1 | 0 | 75 | 539 | 153 | 617 | xyloglucan galactosyltransferase [Eucalyptus grandis] |
DDBJ | BAE98519.1 | 0 | 75 | 539 | 147 | 618 | hypothetical protein [Arabidopsis thaliana] |
RefSeq | NP_179627.2 | 0 | 75 | 539 | 147 | 618 | MUR3 (MURUS 3); catalytic/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
RefSeq | XP_002301846.1 | 0 | 75 | 539 | 120 | 585 | glycosyltransferase, CAZy family GT47 [Populus trichocarpa] |