Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr7g100800.1 |
Family | GT43 |
Protein Properties | Length: 626 Molecular Weight: 70963.5 Isoelectric Point: 10.3776 |
Chromosome | Chromosome/Scaffold: 7 Start: 31813273 End: 31818532 |
Description | Nucleotide-diphospho-sugar transferases superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT43 | 127 | 328 | 0 |
LANTIKLVDQPLLWIVVEAKTESTELPEILRKTGIMYRHVVFSEEFMDLEAELNHQRNLALRHIEHHRLSGIVHFAGLSNVYDLQFFQQLRDIEVFGTWP TALLLANRKRVIIEGPVCDSSQVIGWHLRSMNNETITSPIHISSFAFNSSILWDPERWGRTSSVKDTSQNSIKFVKQVVLEDEAKLKGIPPYCSKILLWR FN |
Full Sequence |
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Protein Sequence Length: 626 Download |
MGLVERSKKK THLWKKAMLH FSLCFVMGFF TGLAPTGKSL IFSSKFEISV SNRTEVVAPQ 60 PSQISTKNGN KSWTAPAPRI HSQKTAAAAT TKLHVKPLPQ LKPKRLLIIV TPTSTKLPYH 120 NVFLRRLANT IKLVDQPLLW IVVEAKTEST ELPEILRKTG IMYRHVVFSE EFMDLEAELN 180 HQRNLALRHI EHHRLSGIVH FAGLSNVYDL QFFQQLRDIE VFGTWPTALL LANRKRVIIE 240 GPVCDSSQVI GWHLRSMNNE TITSPIHISS FAFNSSILWD PERWGRTSSV KDTSQNSIKF 300 VKQVVLEDEA KLKGIPPYCS KILLWRFNFF YRRTISNLLV GVNVHDSWLS EAATVLNCKV 360 GSIPFIYLGL PIGGNASRLV FWGAPSEVVL VDRDSLWFRV LAARNGVEGG NLCSGGRDGS 420 AWWRNIAALP SEGWFHNNVS RSLGDGSSVL FWTDVWVVQS AYNTLIAQVH VDNVVLSPSF 480 WHRDVPLKVV LFVWRLFRDR LPTKVNFHRR HVLGFDAQNC VGGCGLIETS NHLFLHCNIF 540 GSVWNHIYQW LGIATAIPLD VPGHFNQFSL LCGVSKSRQS ILQVIWFVVD RIKLLKFKWL 600 KVKYATLPFN YLGWWLSPFT LLGIG* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam13966 | zf-RVT | 9.0e-11 | 458 | 544 | 88 | + zinc-binding in reverse transcriptase. This domain would appear to be a zinc-binding region of a putative reverse transcriptase. | ||
pfam03360 | Glyco_transf_43 | 4.0e-52 | 127 | 326 | 216 | + Glycosyltransferase family 43. | ||
cd00218 | GlcAT-I | 2.0e-69 | 108 | 329 | 228 | + Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis. Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43). | ||
PLN02458 | PLN02458 | 1.0e-171 | 1 | 329 | 341 | + transferase, transferring glycosyl groups |
Gene Ontology | |
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GO Term | Description |
GO:0015018 | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAX33319.1 | 0 | 1 | 336 | 1 | 346 | secondary cell wall-related glycosyltransferase family 43 [Populus tremula x Populus tremuloides] |
GenBank | ABP65661.1 | 0 | 1 | 336 | 1 | 346 | secondary wall-associated glycosyltransferase family 43B [Populus tremula x Populus alba] |
EMBL | CAI68031.1 | 0 | 1 | 337 | 1 | 337 | beta-3-glucuronyltransferase [Medicago truncatula] |
RefSeq | XP_002323456.1 | 0 | 1 | 336 | 1 | 347 | glycosyl transferase [Populus trichocarpa] |
RefSeq | XP_002326337.1 | 0 | 1 | 347 | 1 | 354 | glycosyl transferase [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2d0j_D | 0.000000000001 | 107 | 325 | 5 | 222 | A Chain A, Crystal Structure Of Human Glcat-S Apo Form |
PDB | 2d0j_C | 0.000000000001 | 107 | 325 | 5 | 222 | A Chain A, Crystal Structure Of Human Glcat-S Apo Form |
PDB | 2d0j_B | 0.000000000001 | 107 | 325 | 5 | 222 | A Chain A, Crystal Structure Of Human Glcat-S Apo Form |
PDB | 2d0j_A | 0.000000000001 | 107 | 325 | 5 | 222 | A Chain A, Crystal Structure Of Human Glcat-S Apo Form |
PDB | 1v84_B | 0.000000000005 | 109 | 325 | 7 | 229 | A Chain A, Crystal Structure Of Human Glcat-S Apo Form |