Basic Information | |
---|---|
Species | Medicago truncatula |
Cazyme ID | Medtr7g102600.1 |
Family | CE8 |
Protein Properties | Length: 399 Molecular Weight: 44042.3 Isoelectric Point: 6.7072 |
Chromosome | Chromosome/Scaffold: 7 Start: 32874805 End: 32876996 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CE8 | 99 | 388 | 0 |
FTVDLNGRANFSSVQKAIDAVPESSFNTTLIIINSGTYREKVVVQANKTNIILQGQGYLDTIIEWNDTANSTGGTSYSYSFAVFASKFTAYNISFKNTSP PPSPGEVGAQAVALRVTGDQAAFYGCGFYGAQDTLNDDSGRHYFKECFIQGSIDFIFGNARSFYEDCTINCIAKQDLDGIGGSITAHGRQSLKEETGFSF VNCNIVGSGKVWLGRAWGAFATVVFSTTNMSDVVAAEGWNDWRDPSRDRSVFFGEYHCIGLGANYTSRVSYARQLRDFEATSYINVSYID |
Full Sequence |
---|
Protein Sequence Length: 399 Download |
MKFNRTLFWL SGFAILLFSI IIVHYTTPPS NTSNTATSSS LDSLLSKIIK LRGAQDFVSL 60 LITSIASTRH HHWMRHKEKC DEAKRASQLI LDYNATITFT VDLNGRANFS SVQKAIDAVP 120 ESSFNTTLII INSGTYREKV VVQANKTNII LQGQGYLDTI IEWNDTANST GGTSYSYSFA 180 VFASKFTAYN ISFKNTSPPP SPGEVGAQAV ALRVTGDQAA FYGCGFYGAQ DTLNDDSGRH 240 YFKECFIQGS IDFIFGNARS FYEDCTINCI AKQDLDGIGG SITAHGRQSL KEETGFSFVN 300 CNIVGSGKVW LGRAWGAFAT VVFSTTNMSD VVAAEGWNDW RDPSRDRSVF FGEYHCIGLG 360 ANYTSRVSYA RQLRDFEATS YINVSYIDGN DWLLNYLT* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02432 | PLN02432 | 3.0e-95 | 92 | 393 | 302 | + putative pectinesterase | ||
PLN02665 | PLN02665 | 2.0e-103 | 98 | 394 | 298 | + pectinesterase family protein | ||
PLN02634 | PLN02634 | 5.0e-106 | 100 | 393 | 301 | + probable pectinesterase | ||
PLN02682 | PLN02682 | 1.0e-127 | 96 | 395 | 307 | + pectinesterase family protein | ||
PLN02304 | PLN02304 | 1.0e-149 | 64 | 396 | 345 | + probable pectinesterase |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI30191.1 | 0 | 33 | 394 | 30 | 400 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_181209.1 | 0 | 79 | 393 | 72 | 385 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002264941.1 | 0 | 99 | 394 | 15 | 310 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002326223.1 | 0 | 86 | 393 | 6 | 313 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002519425.1 | 0 | 27 | 396 | 30 | 370 | Pectinesterase PPE8B precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 8.99998e-41 | 101 | 393 | 11 | 308 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 2e-33 | 101 | 393 | 7 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 1e-17 | 93 | 376 | 31 | 352 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_B | 0.000000000000003 | 93 | 392 | 4 | 337 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_A | 0.000000000000003 | 93 | 392 | 4 | 337 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |