y
Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr7g110420.1 |
Family | CE8 |
Protein Properties | Length: 626 Molecular Weight: 69054.7 Isoelectric Point: 8.4284 |
Chromosome | Chromosome/Scaffold: 7 Start: 35230243 End: 35232380 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 259 | 560 | 0 |
AVVANDGSGQFKTIQAALASYPKGNKDRYVIYVKAGVYDEYITVPKEAVNILMYGDGPAKTIVTGRKNQMAGTNTQNTATFSNTAMGFIGKAMTFENTAG PAGMQAVAFRNIGDMSALVGCHIVGYQDTLYVQTNRQFYRNCVISGTIDFIFGTSATLIQSSTIIVRKGNYDHNEYNVIVADGSPLVNMNTGIVIQDCNI IPEAALVPEKFTVRSYLGRPWQNESKAVIMESTIGDFIHQDGWTTWPEEQNKPEKHHENTCYFAEYANTGPGANVARRVKWKGYKGVISRSEATKYTASI WL |
Full Sequence |
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Protein Sequence Length: 626 Download |
MKGKVIISVV SLILVVGVII GVVVDIRKNG EDPKVQTQQR NLRIMCQNAQ DQKLCHDTLS 60 SVRGADAADP KAYIAAAVKA ATDNVIKAFN MSERLTTEYG KKNGAKMALD DCKDLMQFAL 120 DSLDLSNNCV RDNNIEAVHD QTADMRNWLS AVISYKQGCM EGFDDANDGE KKIKEQFHVQ 180 SLYSVQKVTA VALDIVTGLS DILQQFNLNF DIKPPSRRLL NSEVTVDDQG YPSWISSSGR 240 KLLAKMQRKG WRANIRPNAV VANDGSGQFK TIQAALASYP KGNKDRYVIY VKAGVYDEYI 300 TVPKEAVNIL MYGDGPAKTI VTGRKNQMAG TNTQNTATFS NTAMGFIGKA MTFENTAGPA 360 GMQAVAFRNI GDMSALVGCH IVGYQDTLYV QTNRQFYRNC VISGTIDFIF GTSATLIQSS 420 TIIVRKGNYD HNEYNVIVAD GSPLVNMNTG IVIQDCNIIP EAALVPEKFT VRSYLGRPWQ 480 NESKAVIMES TIGDFIHQDG WTTWPEEQNK PEKHHENTCY FAEYANTGPG ANVARRVKWK 540 GYKGVISRSE ATKYTASIWL DAGPKTAPKS AVECLKIKLM FLFIGRGYWQ ELIESIVWAH 600 NKLKGSPAIE SVNVMHGSET NCYSL* 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02197 | PLN02197 | 2.0e-111 | 26 | 564 | 588 | + pectinesterase | ||
PLN02468 | PLN02468 | 7.0e-114 | 55 | 563 | 510 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02314 | PLN02314 | 1.0e-115 | 27 | 555 | 537 | + pectinesterase | ||
PLN02745 | PLN02745 | 3.0e-139 | 106 | 556 | 456 | + Putative pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 2.0e-139 | 258 | 557 | 300 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0009522 | photosystem I |
GO:0009579 | thylakoid |
GO:0015979 | photosynthesis |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABO80921.1 | 0 | 243 | 567 | 1 | 317 | Pectinesterase [Medicago truncatula] |
GenBank | ABO80924.1 | 0 | 27 | 567 | 27 | 559 | Pectinesterase; Pectinesterase inhibitor [Medicago truncatula] |
GenBank | ABO80928.1 | 0 | 28 | 569 | 28 | 561 | Pectinesterase; Pectinesterase inhibitor [Medicago truncatula] |
GenBank | ABO80931.1 | 0 | 28 | 404 | 28 | 404 | Pectinesterase; Pectinesterase inhibitor [Medicago truncatula] |
GenBank | ABO80933.1 | 0 | 27 | 625 | 27 | 620 | Pectinesterase; Pectinesterase inhibitor [Medicago truncatula] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 253 | 563 | 3 | 305 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 255 | 563 | 1 | 301 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 6e-21 | 258 | 568 | 5 | 342 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 6e-21 | 258 | 568 | 5 | 342 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 6e-21 | 258 | 568 | 5 | 342 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |