y
Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr7g110510.1 |
Family | CE8 |
Protein Properties | Length: 332 Molecular Weight: 35825.9 Isoelectric Point: 9.8054 |
Chromosome | Chromosome/Scaffold: 7 Start: 35262501 End: 35263767 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 14 | 308 | 0 |
AVVAKDGSGQFKTIQAAIAAYPKGNKGRYTIYVKAGVYDEYITIPKDAVNILMYGDGPGKTIVTGRKNGAAGVKTMQTATFANTALGFIGKAMTFENTAG PAGHQAVAFRNQGDMSALVGCHILGYQDTLYVQTNRQFYRNCVISGTVDFIFGTSATLIQDSTIIVRMPSPNQFNTITADGSYVNKLNTGIVIQGCNIVP EAALFPQRFTIKSYLGRPWKVLAKTVVMESTIGDFIHPDGWTPWQGEHFENTCYYAEYANTGPGANIARRIKWKGYHGAISRAEATKFTAGLWLQ |
Full Sequence |
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Protein Sequence Length: 332 Download |
MKGNGWRANV GANAVVAKDG SGQFKTIQAA IAAYPKGNKG RYTIYVKAGV YDEYITIPKD 60 AVNILMYGDG PGKTIVTGRK NGAAGVKTMQ TATFANTALG FIGKAMTFEN TAGPAGHQAV 120 AFRNQGDMSA LVGCHILGYQ DTLYVQTNRQ FYRNCVISGT VDFIFGTSAT LIQDSTIIVR 180 MPSPNQFNTI TADGSYVNKL NTGIVIQGCN IVPEAALFPQ RFTIKSYLGR PWKVLAKTVV 240 MESTIGDFIH PDGWTPWQGE HFENTCYYAE YANTGPGANI ARRIKWKGYH GAISRAEATK 300 FTAGLWLQAG PKSAAEWLTG LNVPNYLGFK A* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02713 | PLN02713 | 3.0e-113 | 15 | 324 | 313 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 1.0e-113 | 9 | 318 | 316 | + pectinesterase/pectinesterase inhibitor | ||
PLN02314 | PLN02314 | 7.0e-118 | 8 | 325 | 319 | + pectinesterase | ||
PLN02745 | PLN02745 | 1.0e-139 | 13 | 328 | 316 | + Putative pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 8.0e-158 | 13 | 309 | 297 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABO80921.1 | 0 | 1 | 331 | 4 | 334 | Pectinesterase [Medicago truncatula] |
GenBank | ABO80924.1 | 0 | 1 | 331 | 246 | 576 | Pectinesterase; Pectinesterase inhibitor [Medicago truncatula] |
GenBank | ABO80928.1 | 0 | 1 | 331 | 246 | 576 | Pectinesterase; Pectinesterase inhibitor [Medicago truncatula] |
GenBank | ABO80933.1 | 0 | 1 | 314 | 246 | 567 | Pectinesterase; Pectinesterase inhibitor [Medicago truncatula] |
GenBank | ACJ83740.1 | 0 | 1 | 330 | 1 | 308 | unknown [Medicago truncatula] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 8 | 329 | 3 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 12 | 310 | 3 | 301 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 6e-23 | 13 | 302 | 5 | 329 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 6e-23 | 13 | 302 | 5 | 329 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 6e-23 | 13 | 302 | 5 | 329 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
BI272853 | 223 | 40 | 262 | 0 |
GR194961 | 279 | 40 | 318 | 0 |
EV267699 | 246 | 85 | 329 | 0 |
JG075711 | 309 | 18 | 323 | 0 |
JG074639 | 312 | 22 | 332 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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