Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr7g111740.1 |
Family | GH5 |
Protein Properties | Length: 430 Molecular Weight: 48413 Isoelectric Point: 6.3238 |
Chromosome | Chromosome/Scaffold: 7 Start: 35898342 End: 35901357 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 73 | 392 | 3.4e-32 |
NGKPLYLNGFNSYFLMIVASDPSTMSKVTTTFQEASQNGLNLARTWAFNDGGYKALQISPGSYDEVIFKGLDFVISEAGKNGVQLILSLVNNWNDYGGKS QYVKWAKEQGQNINNDDDFYVHPIVKQYYKNHVAAVLTRNNTITGLAYKDDPTIFAWELMNEPRSQSDSSGKSFQDWVSEMAAYVKSIDSNHLLEVGLEG FYGESMPEKNPGYGVGTDFISNNQVPEIDFTTIHLYPESWVSSSDEAAQNAFVDKWVQDHIQDSKDILNKPILITEFGKSSKYSGYNVEKRNSYFEKLFN FVYDSASNGGACAGGLFWQF |
Full Sequence |
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Protein Sequence Length: 430 Download |
MGFKNLVILI SVVTILNVLV GQYVNCKGTD GNHYHRRTRH HQHHRNSHTH LGNNKTLYEN 60 GFVQRKETSF VLNGKPLYLN GFNSYFLMIV ASDPSTMSKV TTTFQEASQN GLNLARTWAF 120 NDGGYKALQI SPGSYDEVIF KGLDFVISEA GKNGVQLILS LVNNWNDYGG KSQYVKWAKE 180 QGQNINNDDD FYVHPIVKQY YKNHVAAVLT RNNTITGLAY KDDPTIFAWE LMNEPRSQSD 240 SSGKSFQDWV SEMAAYVKSI DSNHLLEVGL EGFYGESMPE KNPGYGVGTD FISNNQVPEI 300 DFTTIHLYPE SWVSSSDEAA QNAFVDKWVQ DHIQDSKDIL NKPILITEFG KSSKYSGYNV 360 EKRNSYFEKL FNFVYDSASN GGACAGGLFW QFIAQGLDSF RDGYEVILEE NPSTVTVISQ 420 QSKRMSNLK* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG2730 | BglC | 0.007 | 103 | 392 | 314 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
pfam00150 | Cellulase | 4.0e-7 | 101 | 370 | 279 | + Cellulase (glycosyl hydrolase family 5). | ||
COG3934 | COG3934 | 2.0e-28 | 143 | 404 | 264 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABG88068.1 | 0 | 2 | 428 | 6 | 409 | endo-1,4-beta-mannanase [Glycine max] |
EMBL | CAC08442.1 | 0 | 63 | 428 | 45 | 415 | (1-4)-beta-mannan endohydrolase [Coffea arabica] |
EMBL | CAC51690.3 | 0 | 60 | 428 | 24 | 396 | endo-beta-1,4-mannanase [Lactuca sativa] |
RefSeq | XP_002302695.1 | 0 | 43 | 425 | 17 | 400 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515142.1 | 0 | 62 | 428 | 36 | 403 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1rh9_A | 0 | 60 | 428 | 4 | 372 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzq_A | 0 | 61 | 423 | 13 | 381 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzo_A | 0 | 61 | 423 | 13 | 381 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzn_A | 0 | 61 | 423 | 13 | 381 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzm_A | 0 | 61 | 423 | 13 | 381 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |