| Basic Information | |
|---|---|
| Species | Medicago truncatula |
| Cazyme ID | Medtr8g012400.1 |
| Family | CBM43 |
| Protein Properties | Length: 464 Molecular Weight: 51230.6 Isoelectric Point: 6.8631 |
| Chromosome | Chromosome/Scaffold: 8 Start: 2383487 End: 2386491 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM43 | 374 | 457 | 4.1e-28 |
| WCVVAEGANKTAVVEALSYACSQGNRTCELVQPGKPCFEPDSVVGHASYAFSSYWAQFRRVGGTCNFNGLATQIAEDPSYGSCK | |||
| GH17 | 30 | 350 | 0 |
| GVNYGQLGNNLPTPTTSVSLIKNLKAKRVKIYDANPQILKALENTGIQVSIMLPNELVTNVSSNQTLANQWVQTNLVPFYSKTLIRYLLVGNELISSTTN QTWPHIVPAMYRMKHSLTIFGLHKVKVGTPLAMDVLQTSFPPSNGTFRNDIALSVMKPMLEFLHVTNSFFFLDVYPFFAWTSDPININLDYALFESDNIT VTDSGTGLVYTNLFDQMVDAVYFAMERLGYPDIQIFIAETGWPNDGDLDQIGANIHNAGTYNRNFVKKVTKKPPVGTPARPGSILPSFIFALYNENLKTG LGTERHFGLLYPNGSRIYEID | |||
| Full Sequence |
|---|
| Protein Sequence Length: 464 Download |
| MKAIAMVVIF LFVFSSLFTI SSAEISGQPG VNYGQLGNNL PTPTTSVSLI KNLKAKRVKI 60 YDANPQILKA LENTGIQVSI MLPNELVTNV SSNQTLANQW VQTNLVPFYS KTLIRYLLVG 120 NELISSTTNQ TWPHIVPAMY RMKHSLTIFG LHKVKVGTPL AMDVLQTSFP PSNGTFRNDI 180 ALSVMKPMLE FLHVTNSFFF LDVYPFFAWT SDPININLDY ALFESDNITV TDSGTGLVYT 240 NLFDQMVDAV YFAMERLGYP DIQIFIAETG WPNDGDLDQI GANIHNAGTY NRNFVKKVTK 300 KPPVGTPARP GSILPSFIFA LYNENLKTGL GTERHFGLLY PNGSRIYEID LSGKTPEYEY 360 KPLPPPDDYK GKAWCVVAEG ANKTAVVEAL SYACSQGNRT CELVQPGKPC FEPDSVVGHA 420 SYAFSSYWAQ FRRVGGTCNF NGLATQIAED PSYGSCKYPS VIL* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 3.0e-16 | 374 | 445 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 7.0e-35 | 374 | 458 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 1.0e-106 | 30 | 350 | 322 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM65039.1 | 0 | 18 | 463 | 14 | 460 | putative glucan endo-1-3-beta-glucosidase [Arabidopsis thaliana] |
| EMBL | CBI39470.1 | 0 | 11 | 463 | 11 | 467 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_683538.1 | 0 | 18 | 463 | 14 | 460 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002303070.1 | 0 | 7 | 463 | 1 | 461 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002334812.1 | 0 | 11 | 463 | 9 | 465 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 30 | 351 | 2 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1ghs_B | 0 | 30 | 351 | 2 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1ghs_A | 0 | 30 | 351 | 2 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 3f55_D | 0 | 30 | 352 | 3 | 316 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 3f55_C | 0 | 30 | 352 | 3 | 316 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
