Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr8g023150.1 |
Family | CE8 |
Protein Properties | Length: 583 Molecular Weight: 63882.7 Isoelectric Point: 7.7793 |
Chromosome | Chromosome/Scaffold: 8 Start: 5962644 End: 5966329 |
Description | pectin methylesterase 1 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 274 | 567 | 0 |
AVVAKDGSGQYKTIGEALKLVKKKSLQRFVVYVKKGVYVENIDLDKNTWNVMIYGDGMTETVVSGSRNYIDGTPTFETATFAVKGKGFIAKDIQFLNTAG ASKHQAVAMRSGSDQSVFYRCSFVGYQDTLYAHSNRQFYRDCDITGTIDFIFGNAAAVFQNCKIMPRQPMSNQFNTITAQGKKDPNQNSGIVIQKSTFTT LPGDNLIAPTYLGRPWKDFSTTIIMKSEIGSFLKPVGWISWVANVEPPSSILYAEYQNTGPGADVAGRVKWAGYKPALGDEDAIKFTVDSFIQG |
Full Sequence |
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Protein Sequence Length: 583 Download |
MDTMKSFKGY GKVDEIEQQA FQKKTRKRIT IIIISSIILV AVIIAAVAGI LIHKHNTESS 60 SSPNSLPNTE LTPATSLKAV CESTQYPNSC FSSISSLPDS NTTDPEQLFK LSLKVAIDEL 120 SKLSLTRFSE KATEPRVKKA IGVCDNVLAD SLDRLNDSMS TIVDGGKMLS PAKIRDVETW 180 LSAALTDHDT CLDAVGEVNS TAARGVIPEI ERIMRNSTEF ASNSLAIVSK VIRLLSNFEV 240 SNHHRRLLGE FPEWLGTAER RLLATVVNET VPDAVVAKDG SGQYKTIGEA LKLVKKKSLQ 300 RFVVYVKKGV YVENIDLDKN TWNVMIYGDG MTETVVSGSR NYIDGTPTFE TATFAVKGKG 360 FIAKDIQFLN TAGASKHQAV AMRSGSDQSV FYRCSFVGYQ DTLYAHSNRQ FYRDCDITGT 420 IDFIFGNAAA VFQNCKIMPR QPMSNQFNTI TAQGKKDPNQ NSGIVIQKST FTTLPGDNLI 480 APTYLGRPWK DFSTTIIMKS EIGSFLKPVG WISWVANVEP PSSILYAEYQ NTGPGADVAG 540 RVKWAGYKPA LGDEDAIKFT VDSFIQGPEW LPSASVQFDS TI* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02745 | PLN02745 | 2.0e-152 | 56 | 575 | 541 | + Putative pectinesterase/pectinesterase inhibitor | ||
PLN02484 | PLN02484 | 6.0e-159 | 61 | 578 | 532 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02314 | PLN02314 | 0 | 1 | 582 | 595 | + pectinesterase | ||
PLN02468 | PLN02468 | 0 | 7 | 580 | 586 | + putative pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 273 | 567 | 298 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAM65650.1 | 0 | 1 | 576 | 1 | 581 | pectinesterase, putative [Arabidopsis thaliana] |
Swiss-Prot | Q43111 | 0 | 1 | 582 | 1 | 581 | PME3_PHAVU RecName: Full=Pectinesterase 3; Short=PE 3; AltName: Full=Pectin methylesterase 3; Flags: Precursor |
RefSeq | XP_002265217.1 | 0 | 1 | 582 | 1 | 578 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002304256.1 | 0 | 1 | 582 | 1 | 588 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002532945.1 | 0 | 1 | 582 | 1 | 589 | Pectinesterase-3 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 272 | 578 | 7 | 315 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 271 | 578 | 2 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 4e-19 | 270 | 489 | 2 | 245 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 4e-19 | 270 | 489 | 2 | 245 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 4e-19 | 270 | 489 | 2 | 245 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |