| Basic Information | |
|---|---|
| Species | Medicago truncatula |
| Cazyme ID | Medtr8g023310.2 |
| Family | CE8 |
| Protein Properties | Length: 392 Molecular Weight: 43117.5 Isoelectric Point: 9.2464 |
| Chromosome | Chromosome/Scaffold: 8 Start: 6055802 End: 6057309 |
| Description | pectin methylesterase 3 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CE8 | 278 | 360 | 7.7e-30 |
| DVVVAADGSGNFKTVSEAVAAAPLKSSKRYVIKIKAGVYKENVEVPKKKTNIMFLGDGRTNTIITGSRNVVDGSTTFHSATVG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 392 Download |
| MNKIKQSLAG ISNSGNKKKL LISLFTTLLI VASIVAIVAT TTKNSNKSKN NSIASSSLSL 60 SHHSHAILKS ACTTTLYPEL CFSAISSEPN ITHKITNHKD VISLSLNITT RAVEHNYFTV 120 EKLLLRKSLT KREKIALHDC LETIDETLDE LKEAQNDLVL YPSKKTLYQH ADDLKTLISS 180 AITNQVTCLD GFSHDDADKE VRKVLQEGQI HVEHMCSNAL AMTKNMTDKD IAEFEQTNMV 240 LGSNKNRKLL EEENGVGWPE WISAGDRRLL QGSTVKADVV VAADGSGNFK TVSEAVAAAP 300 LKSSKRYVIK IKAGVYKENV EVPKKKTNIM FLGDGRTNTI ITGSRNVVDG STTFHSATVG 360 KYFFTSITFI LLTVIYIHNN AFFFGMLSIN F* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02301 | PLN02301 | 5.0e-50 | 1 | 359 | 363 | + pectinesterase/pectinesterase inhibitor | ||
| PLN02484 | PLN02484 | 2.0e-50 | 11 | 358 | 351 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02933 | PLN02933 | 1.0e-51 | 90 | 360 | 284 | + Probable pectinesterase/pectinesterase inhibitor | ||
| PLN02314 | PLN02314 | 3.0e-52 | 72 | 364 | 307 | + pectinesterase | ||
| PLN02313 | PLN02313 | 3.0e-149 | 1 | 369 | 380 | + Pectinesterase/pectinesterase inhibitor | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAO85706.1 | 0 | 47 | 369 | 41 | 363 | pectin methyl-esterase [Nicotiana benthamiana] |
| EMBL | CAB95025.1 | 0 | 47 | 369 | 41 | 363 | pectin methylesterase [Nicotiana tabacum] |
| EMBL | CAE76633.2 | 0 | 1 | 369 | 1 | 368 | pectin methylesterase [Cicer arietinum] |
| RefSeq | XP_002265171.1 | 0 | 1 | 369 | 31 | 395 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002304257.1 | 0 | 1 | 369 | 1 | 363 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 1e-36 | 273 | 359 | 3 | 89 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 2e-25 | 277 | 381 | 3 | 103 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
