CAZyme Information

Basic Information
SpeciesMedicago truncatula
Cazyme IDMedtr8g072310.1
FamilyGT77
Protein PropertiesLength: 656 Molecular Weight: 74546.7 Isoelectric Point: 6.1155
ChromosomeChromosome/Scaffold: 8 Start: 18953056 End: 18960035
Descriptionxyloglucanase 113
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT771523940
  VSNFLVGAMDTKLLEALYWKGVPVFDMGSHMSTVDVGWGTPTFHKMGREKVILLDSILPFGFEVLMCDTDMVWLKNPLPYLARHPGADILTSSDQVVPTV
  VDDSLEIWQEVSGAYNIGIFHWRPTESAKILAKQWKEMLLADDKIWDQNGFNDILHTQLGPSVDDDSGLVYTFDGKLKLGILPASIFCSGHTYFVQVGTF
  QLTISLIEIFSVYFAMYQQLRLEPYAVHTTFQYGGTEGKRHRL
Full Sequence
Protein Sequence     Length: 656     Download
MAWRNGCEEV TQSKPLFLTI YTVVIIGIVV SSFYVFSAIY SSNTPASQSS AWLSSSISTE    60
DPHHIDHTLN ISQSEKSPTV SIPSPVKENV WPSSVWEIPP SNKKMPPLKN FRLTKELVQQ    120
RVKDNVVIVT FGNYAFMDFI LTWVKKLTDL EVSNFLVGAM DTKLLEALYW KGVPVFDMGS    180
HMSTVDVGWG TPTFHKMGRE KVILLDSILP FGFEVLMCDT DMVWLKNPLP YLARHPGADI    240
LTSSDQVVPT VVDDSLEIWQ EVSGAYNIGI FHWRPTESAK ILAKQWKEML LADDKIWDQN    300
GFNDILHTQL GPSVDDDSGL VYTFDGKLKL GILPASIFCS GHTYFVQVGT FQLTISLIEI    360
FSVYFAMYQQ LRLEPYAVHT TFQYGGTEGK RHRLREAMQF LDPPEYYNPP GGLLSFKPSI    420
PKSMLLSGEH NIESHFTLIN HQTKQIRTAL AIASLLNRTL VVPPLWCRLD RMWYPHPGIL    480
EGSMTRQPFL CPLDHVFEVN VMLKKLPEEE FGPEIGIREY SMLDNPSLPP EVKKSWLDVQ    540
LCKEGTQGCD GSYNSTVGGV LKFPKHSNEE MFMKVFSSFK DVKVIKLSSV EDAFTGFTNK    600
EREDRFRNRV KRYVGIWCCM PDTPIGHIYY DMYWDEKPGW KAIPPQSPEE DHPPL*        660
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
pfam03407Nucleotid_trans3.0e-47152394246+
Gene Ontology
GO TermDescription
GO:0005783endoplasmic reticulum
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
EMBLCBI29197.108865494641unnamed protein product [Vitis vinifera]
RefSeqNP_850250.1026554644unknown protein [Arabidopsis thaliana]
RefSeqXP_002269181.1088654163710PREDICTED: hypothetical protein [Vitis vinifera]
RefSeqXP_002328759.107065475637predicted protein [Populus trichocarpa]
RefSeqXP_002519934.1036544638reticulon3-A3, putative [Ricinus communis]
Transmembrane Domains
StartEnd
1537
125144
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
DT5119933201264450
FY4561062623696300
EV2351133201905090
EX1308723131955070
GR7084013161384530
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_011_00317.5Aquca_011_00317.4Aquca_011_00317.3Aquca_011_00317.2Aquca_011_00317.1
Arabidopsis lyrata902666
Arabidopsis thalianaAT2G35610.1
Brachypodium distachyonBradi1g15410.1Bradi3g45950.1
Brassica rapaBra017310Bra005325
Carica papayaevm.model.supercontig_90.39
Capsella rubellaCarubv10022808m
Chlamydomonas reinhardtiig13982.t1g15149.t1Cre02.g082950.t1.3Cre01.g000400.t1.2Cre01.g000450.t1.2
g4580.t1Cre07.g340950.t1.3Cre04.g224350.t1.3Cre01.g000500.t1.3Cre09.g416650.t1.2
Cre13.g574100.t1.2Cre13.g574041.t1.1Cre13.g574050.t1.2Cre07.g332500.t1.2
Citrus clementinaCiclev10011269m
Citrus sinensisorange1.1g036925m
Cucumis sativusCucsa.018320.1Cucsa.018320.10Cucsa.018320.3
Eucalyptus grandisEucgr.E01147.2Eucgr.E01147.1
Fragaria vescamrna10921.1-v1.0-hybrid
Glycine maxGlyma11g09650.2Glyma01g35690.1Glyma16g08350.1Glyma16g20730.1Glyma16g08350.3
Glyma16g08350.2
Gossypium raimondiiGorai.004G177500.4Gorai.008G219000.2Gorai.004G177500.5Gorai.004G177500.6Gorai.004G177500.7
Gorai.004G177500.9Gorai.004G177500.2Gorai.004G177500.3Gorai.004G177500.1Gorai.008G219000.1
Gorai.004G177500.8
Linum usitatissimumLus10005034Lus10027804
Malus domesticaMDP0000349223
Manihot esculentacassava4.1_003398mcassava4.1_008884m
Medicago truncatulaMedtr5g025590.1
Mimulus guttatusmgv1a002766m
Oryza sativaLOC_Os03g38930.1
Panicum virgatumPavirv00057126mPavirv00045617mPavirv00069114m
Physcomitrella patensPp1s46_165V6.1
Phaseolus vulgarisPhvul.003G278500.1Phvul.002G122000.1
Picea abiesMA_486176g0010MA_10433213g0010
Populus trichocarpaPotri.004G235800.1Potri.004G235800.2
Prunus persicappa002815m
Ricinus communis29827.m002651
Setaria italicaSi034728m
Selaginella moellendorffii127789
Sorghum bicolorSb01g015590.1
Thellungiella halophilaThhalv10016368m
Vitis viniferaGSVIVT01036881001
Volvox carteriVocar20007251mVocar20009385mVocar20010418mVocar20002020mVocar20004159m
Vocar20001219mVocar20001335mVocar20001723mVocar20006862mVocar20009663m
Vocar20008350mVocar20001348m
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny  (This image is cropped. Click for full image.)