y
Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr8g085210.1 |
Family | GH35 |
Protein Properties | Length: 913 Molecular Weight: 101932 Isoelectric Point: 7.4685 |
Chromosome | Chromosome/Scaffold: 8 Start: 23212393 End: 23224918 |
Description | beta galactosidase 9 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 57 | 366 | 0 |
LIIDGHRRMLISAGIHYPRATPEMWPDLIAKAKEGGVDVIETYVFWNGHQPVKGQYNFEGRYDLVKFAKLVASNGLYFFLRIGPYACAEWNFGGFPVWLR DIPGIEFRTNNAPFKEEMKRFVSKVVNLMREEMLFSWQGGPIILLQVRREYGIENEYGNLESSYGNEGKEYVKWAASMALSLGAGVPWVMCKQPDAPYDI IDTCNAYYCDGFKPNSRNKPIFWTENWDGWYTQWGERLPHRPVEDLAFAVARFFQRGGSLQNYYMYFGGTNFGRTAGGPLQITSYDYDAPIDEYGLLNEP KWGHLKDLHA |
Full Sequence |
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Protein Sequence Length: 913 Download |
MKISLQNYSN SKAGTIRGRT VVFTWFCVCV FVASIIVAGA EAAWFKPFNV TYDHRALIID 60 GHRRMLISAG IHYPRATPEM WPDLIAKAKE GGVDVIETYV FWNGHQPVKG QYNFEGRYDL 120 VKFAKLVASN GLYFFLRIGP YACAEWNFGG FPVWLRDIPG IEFRTNNAPF KEEMKRFVSK 180 VVNLMREEML FSWQGGPIIL LQVRREYGIE NEYGNLESSY GNEGKEYVKW AASMALSLGA 240 GVPWVMCKQP DAPYDIIDTC NAYYCDGFKP NSRNKPIFWT ENWDGWYTQW GERLPHRPVE 300 DLAFAVARFF QRGGSLQNYY MYFGGTNFGR TAGGPLQITS YDYDAPIDEY GLLNEPKWGH 360 LKDLHAALKL CEPALVAADS PTYIKLGSKQ EAHVYQENVH REGLNLSISQ ISNKCSAFLA 420 NIDERKAATV TFRGQTYTLP PWSVSILPDC RSAIFNTAKV GAQTSVKLVG SNLPLTSNLL 480 LSQQSIDHNG ISHISKSWMT TKEPINIWIN SSFTAEGIWE HLNVTKDQSD YLWYSTRIYV 540 SDGDILFWKE NAAHPKLAID SVRDILRVFV NGQLIGNVVG HWVKAVQTLQ FQPGYNDLTL 600 LTQTVGLQNY GAFIEKDGAG IRGTIKITGF ENGHIDLSKP LWTYQVGLQG EFLKFYNEES 660 ENAGWVELTP DAIPSTFTWY KTYFDVPGGN DPVALDLESM GKGQAWVNGH HIGRYWTRVS 720 PKTGCQVCDY RGAYDSDKCT TNCGKPTQTL YHVPRSWLKA SNNFLVILEE TGGNPLGISV 780 KLHSASIVCA QVSQSYYPPM QKLLNASLLG QQEVSSNDMI PEMNLRCRDG NIISSITFAS 840 FGTPGGSCQS FSRGNCHAPS SKSIVSKACL GKRSCSIKIS SDVFGGDPCQ DVVKTLSVEA 900 RCITITNGSF QL* 960 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 0.0004 | 72 | 155 | 85 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
COG1874 | LacA | 2.0e-20 | 50 | 358 | 370 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam02140 | Gal_Lectin | 5.0e-25 | 825 | 902 | 82 | + Galactose binding lectin domain. | ||
pfam01301 | Glyco_hydro_35 | 1.0e-152 | 56 | 368 | 328 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 49 | 902 | 861 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
GO:0009341 | beta-galactosidase complex |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAQ62586.1 | 0 | 44 | 910 | 41 | 901 | putative beta-galactosidase [Glycine max] |
DDBJ | BAD91079.1 | 0 | 25 | 902 | 9 | 884 | beta-D-galactosidase [Pyrus pyrifolia] |
DDBJ | BAE72075.1 | 0 | 25 | 902 | 9 | 883 | pear beta-galactosidase3 [Pyrus communis] |
RefSeq | XP_002328900.1 | 0 | 16 | 907 | 2 | 885 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518051.1 | 0 | 42 | 902 | 32 | 886 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 3.00018e-42 | 56 | 364 | 14 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3d3a_A | 0.000003 | 543 | 772 | 383 | 575 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 4e8d_B | 2e-38 | 59 | 351 | 12 | 313 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 4e8d_B | 0.0007 | 551 | 772 | 395 | 573 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 4e8d_A | 2e-38 | 59 | 351 | 12 | 313 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |