y
Basic Information | |
---|---|
Species | Medicago truncatula |
Cazyme ID | Medtr8g085390.1 |
Family | CBM43 |
Protein Properties | Length: 188 Molecular Weight: 19422.9 Isoelectric Point: 7.0363 |
Chromosome | Chromosome/Scaffold: 8 Start: 23339492 End: 23341520 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CBM43 | 30 | 111 | 2.7e-34 |
WCVVRSDASFNALQTALDYACGAGADCLPLQPDGLCFLPNTIQAHASYAFNSYYQKRARAPGSCDFSGTSTIAQTDPSYGSC |
Full Sequence |
---|
Protein Sequence Length: 188 Download |
MASSKPVSVI LLTITMTMMN VNGQGGSASW CVVRSDASFN ALQTALDYAC GAGADCLPLQ 60 PDGLCFLPNT IQAHASYAFN SYYQKRARAP GSCDFSGTST IAQTDPSYGS CVYPSSTSGA 120 GGPNTPTTSV PMSNTNMSSP ATSSPIFGGL SPGLSSPFND NSRAPSKELA KWFLLFFSSL 180 LILSIIS* 240 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 2.0e-21 | 29 | 100 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 7.0e-39 | 29 | 113 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU14573.1 | 0 | 25 | 186 | 24 | 191 | unknown [Glycine max] |
GenBank | ACU17645.1 | 0 | 1 | 185 | 1 | 190 | unknown [Glycine max] |
RefSeq | NP_193096.5 | 0 | 27 | 152 | 58 | 196 | unknown protein [Arabidopsis thaliana] |
RefSeq | XP_002267551.1 | 0 | 26 | 183 | 46 | 210 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002518089.1 | 0 | 1 | 116 | 1 | 113 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 1e-25 | 27 | 118 | 10 | 101 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |