Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr8g088120.1 |
Family | CBM43 |
Protein Properties | Length: 251 Molecular Weight: 27886 Isoelectric Point: 9.4788 |
Chromosome | Chromosome/Scaffold: 8 Start: 24690324 End: 24692319 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 77 | 153 | 1.3e-28 |
VVKKGTSKSDIQAALNHACGEGGADCSQIQPGASCYESNTLPDHASYAFNDYYQKHPIPASCVFGGAATLTSNNPSK |
Full Sequence |
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Protein Sequence Length: 251 Download |
MQTEQNTHKE TPLSVGERFE KLRANQYMHQ GGKICNSSSK ANYLQRWTLE FCSLLYFVCA 60 VSLVQESLQH QVVVNGVVKK GTSKSDIQAA LNHACGEGGA DCSQIQPGAS CYESNTLPDH 120 ASYAFNDYYQ KHPIPASCVF GGAATLTSNN PSKHFIKRKK KVHHDHMVAT HQDHRVHMVA 180 THQVHRVHMA AAPPTKSTRF CNPTSKIRCI HICSSFFVIA VCMWPLGFTS SSKLFSLQAV 240 LVKISRSWIK * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 8.0e-18 | 77 | 145 | 75 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-29 | 77 | 152 | 77 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAG51737.1 | 6e-24 | 77 | 153 | 150 | 226 | AC068667_16 beta-1,3 glucanase, putative; 26636-27432 [Arabidopsis thaliana] |
RefSeq | XP_002283721.1 | 5e-25 | 77 | 152 | 101 | 176 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002300880.1 | 9e-25 | 77 | 151 | 6 | 80 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002331855.1 | 6e-25 | 77 | 152 | 5 | 80 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002519744.1 | 1e-23 | 77 | 155 | 117 | 198 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 0.00000000005 | 77 | 152 | 15 | 90 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |