y
Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr8g088610.1 |
Family | CE8 |
Protein Properties | Length: 379 Molecular Weight: 41964.5 Isoelectric Point: 8.6385 |
Chromosome | Chromosome/Scaffold: 8 Start: 24985603 End: 24987614 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 66 | 360 | 0 |
IVAKDGSGEFTTVTDAINSYSSKKNRHRFIIYVKAGIYNEYITIDKDKTNILLYGDGPTKTIITGSKSLNGGVNKTMNTATFTNLAKDFIAKSITFENTA GHEAGPSVALQVEGDRSAFFDCGIYGYQDTLYAHKQRQFYRNCEISGTIDFIFGHSTTLIQNSKIIVRKPSPGHSNVVVADGTKQKNALTGIVLQNCSIM PDVELLPDRLTVKTYLARPWRSFSRAIFINNVIGDFIQPDGYSVWAPNETNTAHCYFAEFGNTGPGANTQARAKWSKGVISKDEAAKFTAENWLQ |
Full Sequence |
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Protein Sequence Length: 379 Download |
MNRNLVFVST IFVCLVVVAL SNHQNEKITT EEASPHLLEV DYGRYPTWFS LSNRKLLKTE 60 MKPNSIVAKD GSGEFTTVTD AINSYSSKKN RHRFIIYVKA GIYNEYITID KDKTNILLYG 120 DGPTKTIITG SKSLNGGVNK TMNTATFTNL AKDFIAKSIT FENTAGHEAG PSVALQVEGD 180 RSAFFDCGIY GYQDTLYAHK QRQFYRNCEI SGTIDFIFGH STTLIQNSKI IVRKPSPGHS 240 NVVVADGTKQ KNALTGIVLQ NCSIMPDVEL LPDRLTVKTY LARPWRSFSR AIFINNVIGD 300 FIQPDGYSVW APNETNTAHC YFAEFGNTGP GANTQARAKW SKGVISKDEA AKFTAENWLQ 360 ASTWLPATGI PFSPEFES* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02468 | PLN02468 | 3.0e-100 | 46 | 376 | 338 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02197 | PLN02197 | 3.0e-101 | 37 | 371 | 352 | + pectinesterase | ||
PLN02314 | PLN02314 | 7.0e-108 | 45 | 372 | 331 | + pectinesterase | ||
PLN02745 | PLN02745 | 9.0e-118 | 5 | 371 | 374 | + Putative pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 6.0e-135 | 64 | 362 | 302 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABO80924.1 | 0 | 25 | 371 | 207 | 569 | Pectinesterase; Pectinesterase inhibitor [Medicago truncatula] |
GenBank | ABO80928.1 | 0 | 25 | 378 | 207 | 576 | Pectinesterase; Pectinesterase inhibitor [Medicago truncatula] |
GenBank | ABO80933.1 | 0 | 40 | 361 | 226 | 562 | Pectinesterase; Pectinesterase inhibitor [Medicago truncatula] |
EMBL | CBI37069.1 | 0 | 45 | 377 | 65 | 400 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002274176.1 | 0 | 45 | 377 | 229 | 564 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 59 | 373 | 3 | 316 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 64 | 372 | 4 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 2e-22 | 64 | 366 | 5 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 2e-22 | 64 | 366 | 5 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 2e-22 | 64 | 366 | 5 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |