Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr8g091310.1 |
Family | GH5 |
Protein Properties | Length: 542 Molecular Weight: 61908.2 Isoelectric Point: 8.9241 |
Chromosome | Chromosome/Scaffold: 8 Start: 25650610 End: 25654896 |
Description | |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 224 | 495 | 1.26117e-44 |
MRDHWKTYITEEDFRFMSENGLNAVRIPVGWWIAKDPTPPKPFVGGSLKTLDNAFTWAQLIKYGMKVIVDLHAAPASQNGRAHSATRDGYREWGDSSISD TVATIDFLAQRYANRTSLIAIQLMNEPQGVDLGSLKKYYQAGYDAVRKYTSSAYVIMSNPLDRDSKVLLPFVRAFDRVVIDVHYYNLFSDQFSNMNVKQN IDYIKYHRASDLRSLTTSNGPLIFVGEWSGDWKVKNALKKDSQQFMKVQVEVYSRATFGWAYWAYKCDSNNW |
Full Sequence |
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Protein Sequence Length: 542 Download |
MCNKFFYVNL LFIFNLSLFH NVYAAETKKN NLPLKAVNLG NWLVTEGWME PSLFDGIKNN 60 DLLDGTHVQF MSVKLQKYLC AENGGGTIVV SNRTKAFHWE TFRLWRVNET AFNLRVSNKQ 120 FVGLEDENGE NNLVANLDSP GNKETFEIVR NDDDPNKVRI RAPNGLFLQA ISETQVSTKT 180 VYEESSWEDS DPSVFKMTVL TDTILKGEYQ ITNGYGPDKA SKIMRDHWKT YITEEDFRFM 240 SENGLNAVRI PVGWWIAKDP TPPKPFVGGS LKTLDNAFTW AQLIKYGMKV IVDLHAAPAS 300 QNGRAHSATR DGYREWGDSS ISDTVATIDF LAQRYANRTS LIAIQLMNEP QGVDLGSLKK 360 YYQAGYDAVR KYTSSAYVIM SNPLDRDSKV LLPFVRAFDR VVIDVHYYNL FSDQFSNMNV 420 KQNIDYIKYH RASDLRSLTT SNGPLIFVGE WSGDWKVKNA LKKDSQQFMK VQVEVYSRAT 480 FGWAYWAYKC DSNNWSLKWL NPKSGDAGYR SPYLSHAKRA LYHLSYIPIL SLNSLRIIIN 540 Y* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd00257 | Fascin | 0.007 | 76 | 178 | 103 | + Fascin-like domain; members include actin-bundling/crosslinking proteins facsin, histoactophilin and singed; identified in sea urchin, Drosophila, Xenopus, rodents, and humans; The fascin-like domain adopts a beta-trefoil topology and contains an internal threefold repeat; the fascin subgroup contains four copies of the domain; Structurally similar to fibroblast growth factor (FGF) | ||
COG2723 | BglB | 0.0007 | 202 | 295 | 97 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam00150 | Cellulase | 6.0e-18 | 227 | 488 | 274 | + Cellulase (glycosyl hydrolase family 5). | ||
COG2730 | BglC | 4.0e-30 | 188 | 509 | 364 | + Endoglucanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ADD09589.1 | 0 | 1 | 500 | 1 | 496 | unknown [Trifolium repens] |
EMBL | CBI18831.1 | 0 | 5 | 500 | 4 | 497 | unnamed protein product [Vitis vinifera] |
EMBL | CBI33033.1 | 0 | 6 | 500 | 5 | 497 | unnamed protein product [Vitis vinifera] |
EMBL | CBI33035.1 | 0 | 5 | 489 | 4 | 486 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002306319.1 | 0 | 35 | 500 | 1 | 475 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1eqp_A | 6e-32 | 208 | 498 | 45 | 370 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans |
PDB | 2pb1_A | 4e-31 | 208 | 498 | 51 | 376 | A Chain A, Exo-b-(1,3)-glucanase From Candida Albicans In Complex With Unhydrolysed And Covalently Linked 2,4-dinitrophenyl-2-deoxy-2- Fluoro-b-d-glucopyranoside At 1.9 A |
PDB | 1eqc_A | 4e-31 | 208 | 498 | 45 | 370 | A Chain A, Exo-b-(1,3)-glucanase From Candida Albicans In Complex With Unhydrolysed And Covalently Linked 2,4-dinitrophenyl-2-deoxy-2- Fluoro-b-d-glucopyranoside At 1.9 A |