| Basic Information | |
|---|---|
| Species | Medicago truncatula |
| Cazyme ID | Medtr8g104620.1 |
| Family | CE8 |
| Protein Properties | Length: 327 Molecular Weight: 36461.5 Isoelectric Point: 9.6489 |
| Chromosome | Chromosome/Scaffold: 8 Start: 30883432 End: 30888522 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CE8 | 78 | 293 | 0 |
| VAGVMGDGFIAKDMTFENTAGPQKHQAVALRSGADHSVFYRCAFKGFQDTLYVYANRQFYRDCNIYGTIDFIFGNAVTVLQNCNIFVRKPMSNQQNTVTA QGRTDPNENTGIVIHNCRITASSDLKAIQNSVKTYLGRPWQKYSRTVVMKSNLDGLINSEGWAPWMGGFALSTLYYGEYMNVGGGANTDGRVKWPGFHVI TNPSDAVKFSVGNFLA | |||
| Full Sequence |
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| Protein Sequence Length: 327 Download |
| MTWLRRCTTI SLRIRVTFRV MRRTKEKSPM TWHEIVCDGY RKKKNGPKVP VYNQSRLRSS 60 GRTCYFGPQQ KQGAPWTVAG VMGDGFIAKD MTFENTAGPQ KHQAVALRSG ADHSVFYRCA 120 FKGFQDTLYV YANRQFYRDC NIYGTIDFIF GNAVTVLQNC NIFVRKPMSN QQNTVTAQGR 180 TDPNENTGIV IHNCRITASS DLKAIQNSVK TYLGRPWQKY SRTVVMKSNL DGLINSEGWA 240 PWMGGFALST LYYGEYMNVG GGANTDGRVK WPGFHVITNP SDAVKFSVGN FLAGDSWISG 300 SGVPFDAEDG ESIVVVTIED GEIIVM* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02484 | PLN02484 | 5.0e-113 | 83 | 307 | 225 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02301 | PLN02301 | 2.0e-120 | 77 | 305 | 229 | + pectinesterase/pectinesterase inhibitor | ||
| PLN02916 | PLN02916 | 6.0e-124 | 80 | 307 | 228 | + pectinesterase family protein | ||
| PLN02713 | PLN02713 | 2.0e-125 | 81 | 305 | 225 | + Probable pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 5.0e-149 | 77 | 295 | 219 | + Pectinesterase. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN77092.1 | 0 | 80 | 305 | 278 | 503 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI24284.1 | 0 | 77 | 307 | 29 | 257 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002314796.1 | 0 | 80 | 307 | 302 | 529 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002320714.1 | 0 | 80 | 307 | 286 | 512 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002527782.1 | 0 | 80 | 307 | 300 | 527 | Pectinesterase-1 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 77 | 305 | 88 | 315 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 77 | 305 | 84 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1qjv_B | 5e-16 | 70 | 218 | 77 | 246 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 5e-16 | 70 | 218 | 77 | 246 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 2ntq_B | 5e-16 | 70 | 218 | 77 | 246 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| EG688335 | 229 | 79 | 307 | 0 |
| EG688336 | 229 | 79 | 307 | 0 |
| EL894561 | 228 | 78 | 305 | 0 |
| CB970501 | 226 | 80 | 305 | 0 |
| EC939603 | 225 | 81 | 305 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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