Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr8g104820.1 |
Family | GH9 |
Protein Properties | Length: 495 Molecular Weight: 54385.8 Isoelectric Point: 9.2401 |
Chromosome | Chromosome/Scaffold: 8 Start: 30967895 End: 30972034 |
Description | glycosyl hydrolase 9B1 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 30 | 488 | 0 |
DYHDALRKSILFFEGQRSGKLPSDQRLHWRRDSGIHDGATAGVDLTGGYYDAGDNIKFGFPMAFTTTMLAWSVIDFGRVMGPELGNALKSVRWGTDYLLK ATSKIGSGVVFVQVGDPLSDHNCWERPEDMDTLRTVYKIDGSHPGSDVAGETAAALAAASIVFRSRDPAYSKLLLNRAVTVFEFADRHRGAYSNSLRRAV CPFYCDVNGYQDELLWAAAWLHKASRRRLYREYIIRNEVVLRAGDTINEFGWDNKHAGINVLISKEVLMGRANYFSSFKRNADEFICSTLPGFSHAQVQY SPGGLIFKAGGSNMQHVTSLSFLLLAYSNYLSHANKVVPCGDTTATPALLKSLAKRQVNYILGDNPLGMSYMVGYGARYPRRIHHRGSSIPSVSAHPAHI GCKAGSQYFFSPNPNPNVLVGAVVGGPTNTTDSFPDSRPFYQQSEPTTYINAPLVGLLA |
Full Sequence |
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Protein Sequence Length: 495 Download |
MARNALSSIT TFHVLTILLL LLRTIAAVHD YHDALRKSIL FFEGQRSGKL PSDQRLHWRR 60 DSGIHDGATA GVDLTGGYYD AGDNIKFGFP MAFTTTMLAW SVIDFGRVMG PELGNALKSV 120 RWGTDYLLKA TSKIGSGVVF VQVGDPLSDH NCWERPEDMD TLRTVYKIDG SHPGSDVAGE 180 TAAALAAASI VFRSRDPAYS KLLLNRAVTV FEFADRHRGA YSNSLRRAVC PFYCDVNGYQ 240 DELLWAAAWL HKASRRRLYR EYIIRNEVVL RAGDTINEFG WDNKHAGINV LISKEVLMGR 300 ANYFSSFKRN ADEFICSTLP GFSHAQVQYS PGGLIFKAGG SNMQHVTSLS FLLLAYSNYL 360 SHANKVVPCG DTTATPALLK SLAKRQVNYI LGDNPLGMSY MVGYGARYPR RIHHRGSSIP 420 SVSAHPAHIG CKAGSQYFFS PNPNPNVLVG AVVGGPTNTT DSFPDSRPFY QQSEPTTYIN 480 APLVGLLAFF SAHP* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02308 | PLN02308 | 0 | 30 | 494 | 465 | + endoglucanase | ||
PLN02266 | PLN02266 | 0 | 30 | 493 | 464 | + endoglucanase | ||
PLN03009 | PLN03009 | 0 | 30 | 494 | 468 | + cellulase | ||
pfam00759 | Glyco_hydro_9 | 0 | 30 | 488 | 466 | + Glycosyl hydrolase family 9. | ||
PLN02613 | PLN02613 | 0 | 30 | 488 | 463 | + endoglucanase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAQ15175.1 | 0 | 23 | 493 | 28 | 495 | AF357588_1 endo-1,4-beta-glucanase isoform 02 [Fragaria x ananassa] |
GenBank | AAQ15178.1 | 0 | 23 | 493 | 28 | 495 | AF357591_1 endo-1,4-beta-glucanase isoform 05 [Fragaria x ananassa] |
GenBank | ABK92482.1 | 0 | 1 | 494 | 1 | 496 | unknown [Populus trichocarpa] |
RefSeq | XP_002311518.1 | 0 | 1 | 494 | 1 | 496 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002527779.1 | 0 | 7 | 493 | 5 | 491 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 28 | 488 | 2 | 426 | A Chain A, Rhamnogalacturonan Lyase From Aspergillus Aculeatus K150a Active Site Mutant |
PDB | 1ksc_A | 0 | 28 | 488 | 2 | 426 | A Chain A, Rhamnogalacturonan Lyase From Aspergillus Aculeatus K150a Active Site Mutant |
PDB | 1ks8_A | 0 | 28 | 488 | 2 | 426 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_B | 0 | 30 | 490 | 5 | 440 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_A | 0 | 30 | 490 | 5 | 440 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |