Basic Information | |
---|---|
Species | Panicum virgatum |
Cazyme ID | Pavirv00000123m |
Family | GH100 |
Protein Properties | Length: 429 Molecular Weight: 49119.8 Isoelectric Point: 7.6924 |
Chromosome | Chromosome/Scaffold: 039628 Start: 764 End: 3482 |
Description | Plant neutral invertase family protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH100 | 1 | 411 | 0 |
MRDFIPSALAFLMKGEHLIVKNFLVETARLQSREKMVDLFKLGQGVMPASFKVHHRNPTLKTESLLADFGETAIGRVAPVDSGLWWIILLRAYTRWTGDN SLAESPNCQRAMHLILRLCLSEGCDTSPALLCADGCSMIDRRMGIYGYPIEIQALFFMAMRCALSMLKQDSDADFVNHITKRIQALSYHLHSYYWLDFQR LNDIYRYKTEEYSQTALNKFNVIPESIPDWIFDFMPSRGGYFIGNVSPARMDFRWFCLGNFIAILSSLATGEQAEAILDLVEERWEELIGEMPLKICYPA MENQEWQIVTGCDPKNTRWSYHNGGSWPVLLWLLVAVSVKLGRPHLARRAMELMERRLAKDEFPEYYDGKAGRYVGKQARKYQTWSVAGYLVAKMLLDDP SHLRIIALEDD |
Full Sequence |
---|
Protein Sequence Length: 429 Download |
MRDFIPSALA FLMKGEHLIV KNFLVETARL QSREKMVDLF KLGQGVMPAS FKVHHRNPTL 60 KTESLLADFG ETAIGRVAPV DSGLWWIILL RAYTRWTGDN SLAESPNCQR AMHLILRLCL 120 SEGCDTSPAL LCADGCSMID RRMGIYGYPI EIQALFFMAM RCALSMLKQD SDADFVNHIT 180 KRIQALSYHL HSYYWLDFQR LNDIYRYKTE EYSQTALNKF NVIPESIPDW IFDFMPSRGG 240 YFIGNVSPAR MDFRWFCLGN FIAILSSLAT GEQAEAILDL VEERWEELIG EMPLKICYPA 300 MENQEWQIVT GCDPKNTRWS YHNGGSWPVL LWLLVAVSVK LGRPHLARRA MELMERRLAK 360 DEFPEYYDGK AGRYVGKQAR KYQTWSVAGY LVAKMLLDDP SHLRIIALED DGHSRSRAPC 420 LKRSNSCP* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3408 | GDB1 | 3.0e-10 | 78 | 406 | 354 | + Glycogen debranching enzyme [Carbohydrate transport and metabolism] | ||
pfam12899 | Glyco_hydro_100 | 0 | 1 | 400 | 401 | + Alkaline and neutral invertase. This is a family of bacterial and plant alkaline and neutral invertases, EC:3.2.1.26, previously known as Invertase_neut pfam04853. | ||
PLN03005 | PLN03005 | 0 | 1 | 428 | 429 | + beta-fructofuranosidase | ||
PLN02973 | PLN02973 | 0 | 1 | 426 | 427 | + beta-fructofuranosidase | ||
PLN02703 | PLN02703 | 0 | 1 | 425 | 430 | + beta-fructofuranosidase |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004135 | amylo-alpha-1,6-glucosidase activity |
GO:0005978 | glycogen biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAD08010.1 | 0 | 1 | 428 | 134 | 560 | putative alkaline/neutral invertase [Oryza sativa Japonica Group] |
GenBank | EAZ21578.1 | 0 | 1 | 428 | 134 | 532 | hypothetical protein OsJ_05206 [Oryza sativa Japonica Group] |
GenBank | EEC72393.1 | 0 | 1 | 428 | 134 | 561 | hypothetical protein OsI_05674 [Oryza sativa Indica Group] |
RefSeq | NP_177345.1 | 0 | 1 | 426 | 75 | 497 | beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putative [Arabidopsis thaliana] |
RefSeq | XP_002451452.1 | 0 | 1 | 428 | 138 | 563 | hypothetical protein SORBIDRAFT_04g002180 [Sorghum bicolor] |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
DV535313 | 302 | 32 | 333 | 0 |
EE161551 | 303 | 39 | 341 | 0 |
EC888550 | 294 | 48 | 341 | 0 |
DR806946 | 292 | 50 | 341 | 0 |
EC872248 | 280 | 62 | 341 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|