Basic Information | |
---|---|
Species | Panicum virgatum |
Cazyme ID | Pavirv00000252m |
Family | GH17 |
Protein Properties | Length: 259 Molecular Weight: 27048.1 Isoelectric Point: 4.2411 |
Chromosome | Chromosome/Scaffold: 0395426 Start: 1 End: 777 |
Description | beta-1,3-glucanase 2 |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH17 | 2 | 255 | 0 |
DVGNDKVGEFASDPAAAASWVRDNVQAYNQDVDIRYVVVGNEVPGAASVLQAMQNVHAALASAGLAGSVRVSTAVKMDAIDNTSPPSSGVFKDPAAMSPI VQFLAGNGAPLLANVYPYFAYEFSDGIDLNYALFQPSSTTVTDPANGLVYTNLFDAMVDAVRAALDKAGGGGVDVVVSESGWPSADGKGATVDNARTYNQ NLINHAGKGTPRKPGAMEVYVFAMFNEDQKDGDPTEKKFGLFNPDKTPVYPINF |
Full Sequence |
---|
Protein Sequence Length: 259 Download |
LDVGNDKVGE FASDPAAAAS WVRDNVQAYN QDVDIRYVVV GNEVPGAASV LQAMQNVHAA 60 LASAGLAGSV RVSTAVKMDA IDNTSPPSSG VFKDPAAMSP IVQFLAGNGA PLLANVYPYF 120 AYEFSDGIDL NYALFQPSST TVTDPANGLV YTNLFDAMVD AVRAALDKAG GGGVDVVVSE 180 SGWPSADGKG ATVDNARTYN QNLINHAGKG TPRKPGAMEV YVFAMFNEDQ KDGDPTEKKF 240 GLFNPDKTPV YPINFAGN* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00332 | Glyco_hydro_17 | 2.0e-105 | 1 | 255 | 262 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAD10379.1 | 0 | 1 | 255 | 89 | 345 | beta-1,3-glucanase precursor [Oryza sativa Japonica Group] |
GenBank | AAK97761.1 | 0 | 1 | 232 | 80 | 312 | beta-1,3-glucanase [Sorghum bicolor] |
DDBJ | BAB63855.1 | 0 | 1 | 258 | 55 | 317 | putative beta 1,3-glucanase [Oryza sativa Japonica Group] |
RefSeq | NP_001045374.1 | 0 | 1 | 258 | 30 | 292 | Os01g0944900 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002459081.1 | 0 | 1 | 256 | 504 | 760 | hypothetical protein SORBIDRAFT_03g045520 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ghs_B | 0 | 1 | 255 | 52 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 1 | 255 | 52 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghr_A | 0 | 5 | 255 | 56 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1aq0_B | 0 | 5 | 255 | 56 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 1aq0_A | 0 | 5 | 255 | 56 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
CA276169 | 222 | 1 | 221 | 0 |
CN128120 | 191 | 70 | 259 | 0 |
CN140126 | 178 | 83 | 259 | 0 |
CD423755 | 169 | 92 | 259 | 0 |
CA276169 | 34 | 220 | 252 | 1.4 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|