Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00000605m |
Family | GH47 |
Protein Properties | Length: 231 Molecular Weight: 25948.7 Isoelectric Point: 6.3965 |
Chromosome | Chromosome/Scaffold: 039399 Start: 69 End: 4083 |
Description | Glycosyl hydrolase family 47 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH47 | 5 | 183 | 0 |
SYDDQLLHLAADLAQRLLPAFDTPTGIPFGSINLKYGVDENESKITSTAAGGTLTLEFGILSRLTNNTVFERVTKNSVRGIWSRRSKLNLVGAHINVFTG EWTQKDAGIGTSIDSFYEYLLKAYLLFGDEEYLYIFQEAYKAAMHYLHHDPWYVEVNMNSGATVWPLFNSLQAFWPGLQ |
Full Sequence |
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Protein Sequence Length: 231 Download |
MRIQSYDDQL LHLAADLAQR LLPAFDTPTG IPFGSINLKY GVDENESKIT STAAGGTLTL 60 EFGILSRLTN NTVFERVTKN SVRGIWSRRS KLNLVGAHIN VFTGEWTQKD AGIGTSIDSF 120 YEYLLKAYLL FGDEEYLYIF QEAYKAAMHY LHHDPWYVEV NMNSGATVWP LFNSLQAFWP 180 GLQPEMLILL FEHMMPSSAS GKSMVSPLKV LILLHQLSRM DNAATRYGQS * 240 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PTZ00470 | PTZ00470 | 6.0e-14 | 23 | 151 | 136 | + glycoside hydrolase family 47 protein; Provisional | ||
pfam01532 | Glyco_hydro_47 | 3.0e-50 | 23 | 183 | 173 | + Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2). |
Gene Ontology | |
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GO Term | Description |
GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity |
GO:0005509 | calcium ion binding |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACL54405.1 | 0 | 1 | 190 | 1 | 190 | unknown [Zea mays] |
DDBJ | BAD52943.1 | 0 | 1 | 183 | 153 | 335 | putative aspartyl(D) tRNA Synthetase (89.0 kD)(drs-2C) [Oryza sativa Japonica Group] |
RefSeq | NP_001044401.1 | 0 | 1 | 183 | 161 | 343 | Os01g0773600 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001132501.1 | 0 | 1 | 183 | 149 | 331 | hypothetical protein LOC100193961 [Zea mays] |
RefSeq | XP_002456427.1 | 0 | 1 | 183 | 149 | 331 | hypothetical protein SORBIDRAFT_03g036080 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 4ayr_A | 4e-23 | 3 | 182 | 112 | 294 | A Chain A, Crystral Structure Of The N-Terminal Subunit Of Human Maltase- Glucoamylase |
PDB | 4ayq_A | 4e-23 | 3 | 182 | 112 | 294 | A Chain A, Crystral Structure Of The N-Terminal Subunit Of Human Maltase- Glucoamylase |
PDB | 4ayp_A | 4e-23 | 3 | 182 | 112 | 294 | A Chain A, Crystral Structure Of The N-Terminal Subunit Of Human Maltase- Glucoamylase |
PDB | 4ayo_A | 4e-23 | 3 | 182 | 112 | 294 | A Chain A, Structure Of The Gh47 Processing Alpha-1,2-mannosidase From Caulobacter Strain K31 |
PDB | 1nxc_A | 0.000000000000002 | 14 | 130 | 130 | 250 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FL986799 | 203 | 29 | 231 | 0 |
EL474393 | 183 | 1 | 183 | 0 |
EL445663 | 183 | 1 | 183 | 0 |
EY100809 | 183 | 1 | 183 | 0 |
EY100809 | 29 | 185 | 213 | 0.41 |
Sequence Alignments (This image is cropped. Click for full image.) |
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